| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16051 | 2:23,492,372-23,495,515 | - | C1H2g19763 | CX2g024311 | LOC_Os02g41890 | Os02g0629400 | OsPSKR1 | Detail |
| C2H2g04434 | 2:23,510,511-23,510,887 | + | C1H2g07403 | CX2g024249 | LOC_Os02g41904 | Os02g0629800 | CAL1, OsDEF7 | Detail |
| C2H2g27876 | 2:23,511,988-23,513,196 | + | C1H2g07403 | CX2g024249 | LOC_Os02g41910 | Os02g0630000 | - | Detail |
| C2H2g04734 | 2:23,513,894-23,514,597 | - | C1H2g06769 | - | LOC_Os02g41920 | Os02g0630100 | - | Detail |
| C2H2g01558 | 2:23,514,635-23,514,862 | - | C1H2g17432 | - | LOC_Os02g41920 | Os02g0630100 | - | Detail |
| C2H2g08486 | 2:23,515,800-23,516,912 | + | C1H2g18657 | CX2g021065 | LOC_Os02g41930 | Os02g0630000 | - | Detail |
| C2H2g02866 | 2:23,517,314-23,517,934 | - | - | CX2g019866 | LOC_Os02g41940 | Os02g0630250 | - | Detail |
| C2H2g23913 | 2:23,522,549-23,523,248 | - | C1H2g25377 | CX2g023936 | LOC_Os02g41954 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H2g16265 | 2:23,524,298-23,524,950 | - | C1H2g25377 | CX2g023936 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| C2H2g26818 | 2:23,526,490-23,527,475 | - | C1H2g31811 | CX2g023936 | LOC_Os02g41954 | Os02g0630300 | OsGA2ox9 | Detail |
| C2H2g20874 | 2:23,555,745-23,556,230 | + | C1H2g28250 | CX2g024050 | LOC_Os02g41980 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g03348 | 2:23,558,844-23,562,789 | + | C1H2g23091 | CX2g023391 | LOC_Os02g41990 | Os02g0631000 | - | Detail |
| C2H2g04153 | 2:23,566,722-23,567,855 | + | C1H2g14795 | CX2g021046 | LOC_Os02g42000 | Os02g0631100 | - | Detail |
| C2H2g07998 | 2:23,569,194-23,576,069 | - | C1H2g15067 | CX2g021591 | LOC_Os02g42020 | Os02g0631200 | - | Detail |
| C2H2g11029 | 2:23,589,296-23,600,534 | - | C1H2g17736 | CX2g020065 | LOC_Os02g42040 | Os02g0631500 | - | Detail |
| C2H2g14005 | 2:23,601,920-23,602,788 | - | C1H2g09662 | CX2g020722 | LOC_Os02g42060 | Os02g0631700 | RR11, OsRR11, Rra8, OsRRA8 | Detail |
| C2H2g25237 | 2:23,607,196-23,607,504 | - | C1H2g15956 | - | - | - | - | Detail |
| C2H2g02788 | 2:23,608,232-23,608,917 | - | C1H2g01302 | CX2g019329 | - | - | - | Detail |
| C2H2g13888 | 2:23,613,014-23,617,914 | + | C1H2g09889 | CX2g024149 | LOC_Os02g42110 | Os02g0632100 | OsWee1 | Detail |
| C2H2g12352 | 2:23,619,022-23,619,384 | + | C1H2g28960 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g041089 | 5:18,927,580-18,930,785 | - | C1H5g29915 | C2H5g00805 | LOC_Os05g38370 | Os05g0458100 | - | Detail |
| CX5g037231 | 5:18,934,220-18,934,483 | - | C1H5g09153 | C2H5g23848 | LOC_Os05g38380 | Os05g0458200 | - | Detail |
| CX5g038667 | 5:18,937,288-18,940,011 | - | C1H5g01083 | C2H5g08194 | LOC_Os05g38390 | Os05g0458300 | - | Detail |
| CX5g036806 | 5:18,942,651-18,952,000 | + | C1H5g05610 | C2H5g09696 | LOC_Os05g38400 | Os05g0458400 | - | Detail |
| CX5g039723 | 5:18,954,783-18,956,721 | - | C1H5g13909 | C2H5g22786 | LOC_Os05g38410 | Os05g0458500 | - | Detail |
| CX5g039152 | 5:18,963,225-18,965,149 | + | C1H5g13909 | C2H5g22786 | LOC_Os05g38410 | Os05g0458600 | - | Detail |
| CX5g037139 | 5:18,971,323-18,977,998 | - | C1H5g06967 | C2H5g14046 | LOC_Os05g38460 | Os05g0459000 | OsMYB3R2-L | Detail |
| CX5g041142 | 5:18,981,665-18,982,234 | + | - | C2H5g14977 | - | Os05g0459200 | - | Detail |
| CX5g039690 | 5:18,986,132-18,986,815 | + | C1H5g11303 | C2H5g27082 | LOC_Os05g38470 | Os05g0459300 | - | Detail |
| CX5g039998 | 5:18,991,285-18,991,443 | + | - | - | - | - | - | Detail |
| CX5g041038 | 5:18,992,812-18,995,953 | + | C1H5g22722 | C2H5g02762 | LOC_Os05g38480 | Os05g0459400 | - | Detail |
| CX5g037014 | 5:18,999,259-19,003,758 | + | C1H5g27985 | C2H5g17337 | LOC_Os05g38490 | Os05g0459600 | - | Detail |
| CX5g040529 | 5:19,006,184-19,007,506 | + | C1H5g26616 | C2H5g15850 | LOC_Os05g38500 | Os05g0459700 | - | Detail |
| CX5g039696 | 5:19,014,946-19,015,951 | + | C1H5g21623 | C2H5g03630 | LOC_Os05g38520 | Os05g0459900 | - | Detail |
| CX5g037601 | 5:19,018,484-19,021,263 | - | C1H5g06999 | C2H5g16384 | LOC_Os05g38530 | Os05g0460000 | - | Detail |
| CX5g039299 | 5:19,032,886-19,036,373 | + | C1H5g19906 | C2H5g11460 | LOC_Os05g38550 | Os05g0460200 | - | Detail |
| CX5g037542 | 5:19,041,235-19,041,666 | + | C1H5g22852 | C2H5g26633 | LOC_Os05g38560 | Os05g0460475 | - | Detail |
| CX5g041122 | 5:19,041,834-19,045,088 | - | C1H5g25738 | C2H5g11086 | LOC_Os05g38570 | Os05g0460600 | - | Detail |
| CX5g037940 | 5:19,046,388-19,048,412 | - | C1H5g25326 | C2H5g25868 | LOC_Os05g38580 | Os05g0460700 | - | Detail |
| CX5g038780 | 5:19,049,350-19,052,100 | - | C1H5g26281 | C2H5g10587 | LOC_Os05g38590 | Os05g0460800 | - | Detail |