| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g11310 | 6:1,537,223-1,538,105 | + | C1H6g12632 | CX6g045336 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| C2H6g12351 | 6:1,551,044-1,552,073 | + | C1H6g28945 | CX6g042238 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| C2H6g07431 | 6:1,553,345-1,560,023 | - | C1H6g16218 | CX6g041483 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| C2H6g08771 | 6:1,565,592-1,565,798 | - | - | CX6g042795 | LOC_Os06g04889 | Os06g0140900 | - | Detail |
| C2H6g06281 | 6:1,568,563-1,569,963 | - | C1H6g10901 | CX6g042963 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| C2H6g22276 | 6:1,571,005-1,574,212 | - | C1H6g22682 | CX6g042744 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| C2H6g22440 | 6:1,577,164-1,577,822 | - | C1H6g07568 | CX6g044396 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| C2H6g06397 | 6:1,584,919-1,585,698 | - | C1H6g14984 | - | LOC_Os06g05020 | Os06g0141400 | - | Detail |
| C2H6g02034 | 6:1,591,453-1,592,070 | - | C1H6g01608 | - | LOC_Os06g05010 | Os06g0142200 | - | Detail |
| C2H6g13986 | 6:1,596,693-1,597,253 | - | C1H6g04172 | - | LOC_Os06g05010 | Os06g0142350 | - | Detail |
| C2H6g28627 | 6:1,599,565-1,601,073 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142000 | - | Detail |
| C2H6g02748 | 6:1,602,170-1,604,257 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| C2H6g19975 | 6:1,605,035-1,608,277 | + | C1H6g27997 | CX6g044459 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| C2H6g03882 | 6:1,609,422-1,610,072 | - | C1H6g15081 | - | LOC_Os06g04990 | Os06g0142200 | - | Detail |
| C2H6g29967 | 6:1,615,084-1,615,611 | - | C1H6g30995 | - | LOC_Os06g05000 | Os06g0142300 | - | Detail |
| C2H6g10296 | 6:1,622,811-1,623,389 | - | C1H6g18923 | - | LOC_Os06g05020 | Os06g0142400 | - | Detail |
| C2H6g07918 | 6:1,628,484-1,631,927 | + | C1H6g25792 | CX6g041298 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| C2H6g07121 | 6:1,635,275-1,640,239 | - | C1H6g15035 | CX6g042388 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| C2H6g10352 | 6:1,642,473-1,643,852 | - | C1H6g26949 | CX6g042647 | LOC_Os06g05070 | Os06g0142650 | MAK4 | Detail |
| C2H6g12414 | 6:1,644,837-1,647,316 | - | C1H6g04865 | CX6g043519 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037653 | 5:18,806,168-18,807,813 | + | C1H5g18222 | C2H5g21494 | LOC_Os05g38140 | Os05g0455400 | OsbHLH58, OsPRI2 | Detail |
| CX5g038237 | 5:18,809,294-18,815,228 | - | C1H5g05465 | C2H5g15588 | LOC_Os05g38150 | Os05g0455500 | P5CS2, OsP5CS1 | Detail |
| CX5g039333 | 5:18,818,517-18,821,504 | + | C1H5g03707 | C2H5g29702 | LOC_Os05g38160 | Os05g0455600 | - | Detail |
| CX5g036880 | 5:18,822,480-18,826,565 | - | C1H5g15257 | C2H5g07721 | LOC_Os05g38170 | Os05g0455700 | - | Detail |
| CX5g039124 | 5:18,827,987-18,831,062 | + | C1H5g24331 | C2H5g09326 | LOC_Os05g38180 | Os05g0455800 | - | Detail |
| CX5g039226 | 5:18,832,952-18,835,576 | + | C1H5g20708 | C2H5g22995 | LOC_Os05g38190 | Os05g0455900 | - | Detail |
| CX5g038180 | 5:18,839,656-18,841,327 | - | C1H5g20913 | C2H5g06077 | LOC_Os05g38210 | Os05g0456000 | - | Detail |
| CX5g039970 | 5:18,842,157-18,849,365 | - | C1H5g23637 | C2H5g16890 | LOC_Os05g38230 | Os05g0456200 | - | Detail |
| CX5g040017 | 5:18,856,332-18,858,009 | + | C1H5g29090 | C2H5g21931 | LOC_Os05g38250 | Os05g0456500 | - | Detail |
| CX5g039920 | 5:18,861,445-18,861,717 | - | C1H5g00525 | C2H5g17856 | LOC_Os05g38264 | Os05g0456900 | - | Detail |
| CX5g038189 | 5:18,866,270-18,870,762 | - | C1H5g05737 | C2H5g16298 | LOC_Os05g38270 | Os05g0456925 | - | Detail |
| CX5g040829 | 5:18,873,808-18,874,158 | + | C1H5g19303 | C2H5g10696 | - | Os05g0457000 | - | Detail |
| CX5g037372 | 5:18,874,803-18,876,289 | - | C1H5g06161 | C2H5g10559 | LOC_Os05g38290 | Os05g0457200 | OsPP2C49 | Detail |
| CX5g036966 | 5:18,879,121-18,879,945 | - | - | - | LOC_Os05g38310 | Os05g0160200 | - | Detail |
| CX5g037387 | 5:18,888,338-18,893,795 | - | C1H5g16653 | C2H5g01697 | LOC_Os05g39490 | - | - | Detail |
| CX5g038384 | 5:18,902,123-18,903,655 | + | C1H5g31777 | C2H5g09348 | LOC_Os05g38320 | Os05g0457600 | - | Detail |
| CX5g038584 | 5:18,905,229-18,909,441 | - | C1H5g25102 | C2H5g18834 | LOC_Os05g38330 | Os05g0457700 | - | Detail |
| CX5g039901 | 5:18,913,401-18,913,550 | + | - | - | - | - | - | Detail |
| CX5g040952 | 5:18,916,180-18,918,662 | + | C1H5g06264 | C2H5g25191 | LOC_Os05g38350 | Os05g0457800 | - | Detail |
| CX5g039661 | 5:18,923,604-18,926,468 | + | C1H5g14362 | C2H5g15667 | LOC_Os05g38360 | Os05g0458000 | - | Detail |