| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g13057 | 9:12,584,138-12,585,307 | - | C2H9g20999 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C1H9g23603 | 9:12,587,943-12,590,276 | - | C2H9g15585 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C1H9g04652 | 9:12,593,636-12,598,556 | - | C2H9g18547 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C1H9g01940 | 9:12,615,438-12,619,954 | + | C2H9g29866 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C1H9g20433 | 9:12,620,407-12,626,122 | - | C2H9g13149 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C1H9g21248 | 9:12,635,681-12,639,402 | + | C2H9g06178 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C1H9g20875 | 9:12,649,113-12,652,671 | + | C2H9g01199 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C1H9g17046 | 9:12,653,522-12,654,362 | + | C2H9g29489 | - | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g17486 | 9:12,661,767-12,665,414 | + | C2H9g29489 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g03392 | 9:12,670,046-12,672,492 | + | C2H9g01038 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C1H9g16029 | 9:12,674,210-12,680,470 | - | C2H9g24507 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C1H9g26575 | 9:12,683,243-12,685,087 | + | C2H9g10831 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C1H9g05792 | 9:12,689,878-12,692,291 | + | C2H9g19598 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g02235 | 9:12,693,511-12,694,089 | + | C2H9g25061 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g00425 | 9:12,707,019-12,709,306 | + | C2H9g10731 | CX9g057342 | LOC_Os09g25610 | Os09g0424200 | - | Detail |
| C1H9g11995 | 9:12,710,832-12,714,328 | - | C2H9g23538 | CX9g056823 | LOC_Os09g25625 | Os09g0424300 | - | Detail |
| C1H9g23061 | 9:12,721,715-12,722,705 | + | C2H9g21679 | CX9g057732 | - | - | - | Detail |
| C1H9g16841 | 9:12,724,903-12,725,151 | + | C2H9g08773 | - | - | Os09g0424501 | - | Detail |
| C1H9g06900 | 9:12,725,160-12,730,885 | + | C2H9g17706 | CX9g055223 | LOC_Os09g25640 | Os09g0424600 | - | Detail |
| C1H9g23183 | 9:12,731,686-12,739,342 | - | C2H9g22032 | CX9g054887 | LOC_Os09g25650 | Os09g0424701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037653 | 5:18,806,168-18,807,813 | + | C1H5g18222 | C2H5g21494 | LOC_Os05g38140 | Os05g0455400 | OsbHLH58, OsPRI2 | Detail |
| CX5g038237 | 5:18,809,294-18,815,228 | - | C1H5g05465 | C2H5g15588 | LOC_Os05g38150 | Os05g0455500 | P5CS2, OsP5CS1 | Detail |
| CX5g039333 | 5:18,818,517-18,821,504 | + | C1H5g03707 | C2H5g29702 | LOC_Os05g38160 | Os05g0455600 | - | Detail |
| CX5g036880 | 5:18,822,480-18,826,565 | - | C1H5g15257 | C2H5g07721 | LOC_Os05g38170 | Os05g0455700 | - | Detail |
| CX5g039124 | 5:18,827,987-18,831,062 | + | C1H5g24331 | C2H5g09326 | LOC_Os05g38180 | Os05g0455800 | - | Detail |
| CX5g039226 | 5:18,832,952-18,835,576 | + | C1H5g20708 | C2H5g22995 | LOC_Os05g38190 | Os05g0455900 | - | Detail |
| CX5g038180 | 5:18,839,656-18,841,327 | - | C1H5g20913 | C2H5g06077 | LOC_Os05g38210 | Os05g0456000 | - | Detail |
| CX5g039970 | 5:18,842,157-18,849,365 | - | C1H5g23637 | C2H5g16890 | LOC_Os05g38230 | Os05g0456200 | - | Detail |
| CX5g040017 | 5:18,856,332-18,858,009 | + | C1H5g29090 | C2H5g21931 | LOC_Os05g38250 | Os05g0456500 | - | Detail |
| CX5g039920 | 5:18,861,445-18,861,717 | - | C1H5g00525 | C2H5g17856 | LOC_Os05g38264 | Os05g0456900 | - | Detail |
| CX5g038189 | 5:18,866,270-18,870,762 | - | C1H5g05737 | C2H5g16298 | LOC_Os05g38270 | Os05g0456925 | - | Detail |
| CX5g040829 | 5:18,873,808-18,874,158 | + | C1H5g19303 | C2H5g10696 | - | Os05g0457000 | - | Detail |
| CX5g037372 | 5:18,874,803-18,876,289 | - | C1H5g06161 | C2H5g10559 | LOC_Os05g38290 | Os05g0457200 | OsPP2C49 | Detail |
| CX5g036966 | 5:18,879,121-18,879,945 | - | - | - | LOC_Os05g38310 | Os05g0160200 | - | Detail |
| CX5g037387 | 5:18,888,338-18,893,795 | - | C1H5g16653 | C2H5g01697 | LOC_Os05g39490 | - | - | Detail |
| CX5g038384 | 5:18,902,123-18,903,655 | + | C1H5g31777 | C2H5g09348 | LOC_Os05g38320 | Os05g0457600 | - | Detail |
| CX5g038584 | 5:18,905,229-18,909,441 | - | C1H5g25102 | C2H5g18834 | LOC_Os05g38330 | Os05g0457700 | - | Detail |
| CX5g039901 | 5:18,913,401-18,913,550 | + | - | - | - | - | - | Detail |
| CX5g040952 | 5:18,916,180-18,918,662 | + | C1H5g06264 | C2H5g25191 | LOC_Os05g38350 | Os05g0457800 | - | Detail |
| CX5g039661 | 5:18,923,604-18,926,468 | + | C1H5g14362 | C2H5g15667 | LOC_Os05g38360 | Os05g0458000 | - | Detail |