| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14689 | 4:17,498,476-17,499,604 | + | C1H4g00507 | CX4g034163 | LOC_Os04g33870 | Os04g0415100 | - | Detail |
| C2H4g24946 | 4:17,505,394-17,507,226 | + | C1H4g11437 | CX4g033864 | LOC_Os04g33880 | Os04g0415200 | - | Detail |
| C2H4g19875 | 4:17,512,048-17,512,605 | + | - | - | LOC_Os04g33900 | Os04g0415600 | - | Detail |
| C2H4g19861 | 4:17,518,322-17,518,997 | + | C1H4g17536 | CX4g032762 | LOC_Os04g33920 | Os04g0415800 | - | Detail |
| C2H4g09747 | 4:17,522,153-17,523,007 | + | C1H4g29189 | CX4g034185 | LOC_Os04g33930 | Os04g0415800 | - | Detail |
| C2H4g16694 | 4:17,523,874-17,524,605 | + | C1H4g07179 | CX4g035734 | LOC_Os04g33940 | Os04g0416000 | - | Detail |
| C2H4g00223 | 4:17,524,897-17,530,291 | - | C1H4g19958 | CX4g035193 | LOC_Os04g33950 | Os04g0416100 | OsE2Fa-3 | Detail |
| C2H4g02278 | 4:17,536,101-17,537,996 | + | C1H4g19221 | CX4g036299 | LOC_Os04g33970 | Os04g0416400 | - | Detail |
| C2H4g08743 | 4:17,539,031-17,539,603 | + | C1H4g02442 | CX4g036299 | LOC_Os04g33970 | - | - | Detail |
| C2H4g02387 | 4:17,544,023-17,547,683 | + | C1H4g24309 | CX4g035969 | LOC_Os04g33980 | Os04g0416500 | - | Detail |
| C2H4g26517 | 4:17,554,892-17,556,067 | - | C1H4g25538 | CX4g032955 | LOC_Os04g33990 | Os04g0416700 | - | Detail |
| C2H4g30043 | 4:17,560,725-17,561,271 | + | C1H4g18396 | CX4g034560 | - | - | - | Detail |
| C2H4g21787 | 4:17,563,491-17,570,569 | + | C1H4g22240 | CX4g036482 | LOC_Os04g34000 | Os04g0416900 | - | Detail |
| C2H4g11943 | 4:17,569,516-17,572,602 | - | C1H4g22652 | CX4g032874 | LOC_Os04g34010 | Os04g0417000 | - | Detail |
| C2H4g28743 | 4:17,619,939-17,620,557 | + | - | - | - | - | - | Detail |
| C2H4g20144 | 4:17,628,933-17,633,909 | - | C1H4g23500 | CX4g031544 | LOC_Os04g34080 | Os04g0417800 | - | Detail |
| C2H4g01329 | 4:17,642,352-17,645,445 | + | C1H4g21415 | CX4g032049 | LOC_Os04g34100 | Os04g0418000 | - | Detail |
| C2H4g00094 | 4:17,678,396-17,679,615 | - | C1H4g23677 | CX4g033097 | LOC_Os12g23430 | - | - | Detail |
| C2H4g14390 | 4:17,680,154-17,681,298 | - | C1H4g22739 | CX4g033097 | LOC_Os12g23400 | - | - | Detail |
| C2H4g10939 | 4:17,686,820-17,687,191 | + | C1H4g13632 | CX4g032730 | LOC_Os04g34150 | Os04g0418600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038677 | 5:18,457,194-18,461,670 | - | C1H5g30847 | C2H5g22407 | LOC_Os12g23400 | Os05g0256350 | - | Detail |
| CX5g039654 | 5:18,465,069-18,465,515 | + | - | C2H5g07457 | LOC_Os05g37530 | Os05g0447800 | - | Detail |
| CX5g039030 | 5:18,472,405-18,476,482 | + | C1H5g03822 | C2H5g11261 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| CX5g039241 | 5:18,493,411-18,494,418 | + | C1H5g28240 | C2H5g08320 | LOC_Os05g37640 | Os05g0448675 | - | Detail |
| CX5g037395 | 5:18,496,504-18,496,788 | - | C1H5g23210 | C2H5g04056 | - | Os05g0449100 | - | Detail |
| CX5g040111 | 5:18,497,408-18,498,850 | - | C1H5g23210 | C2H5g04056 | LOC_Os05g37660 | Os05g0449200 | - | Detail |
| CX5g037128 | 5:18,512,055-18,514,358 | + | C1H5g08417 | C2H5g04693 | LOC_Os05g37690 | Os05g0449500 | OsCOI1b, OsCOI1H, OsFbox260, Os_F0646 | Detail |
| CX5g040292 | 5:18,523,020-18,525,983 | + | C1H5g01253 | C2H5g26890 | LOC_Os05g37700 | Os05g0449600 | - | Detail |
| CX5g036943 | 5:18,534,387-18,534,605 | + | - | - | - | - | - | Detail |
| CX5g037176 | 5:18,536,715-18,537,788 | - | C1H5g19157 | C2H5g03693 | LOC_Os05g37730 | Os05g0449900 | Os2R_MYB57 | Detail |
| CX5g040510 | 5:18,543,810-18,543,992 | - | - | - | - | - | - | Detail |
| CX5g038050 | 5:18,552,496-18,552,663 | + | - | - | - | - | - | Detail |
| CX5g037438 | 5:18,559,706-18,559,855 | - | - | - | - | - | - | Detail |
| CX5g038946 | 5:18,559,918-18,560,088 | + | - | - | - | - | - | Detail |
| CX5g037869 | 5:18,564,559-18,565,374 | + | C1H5g14659 | C2H5g27025 | LOC_Os05g37780 | Os05g0450300 | - | Detail |
| CX5g039495 | 5:18,579,969-18,581,957 | + | C1H5g01767 | C2H5g25395 | LOC_Os05g37800 | Os05g0450600 | - | Detail |
| CX5g038272 | 5:18,599,096-18,602,352 | + | C1H5g07138 | C2H5g19098 | LOC_Os05g37820 | Os05g0451100 | OsPHT4;2 | Detail |
| CX5g039541 | 5:18,602,563-18,602,766 | - | - | - | - | Os05g0451200 | - | Detail |
| CX5g039929 | 5:18,603,363-18,605,063 | - | C1H5g30639 | C2H5g23791 | LOC_Os05g37830 | Os05g0451300 | - | Detail |
| CX5g038310 | 5:18,615,354-18,618,954 | + | C1H5g02168 | C2H5g16211 | LOC_Os05g37880 | Os05g0451900 | - | Detail |