| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g11255 | 5:19,342,606-19,344,167 | + | C2H5g14285 | CX5g039945 | LOC_Os05g40240 | Os05g0480800 | - | Detail |
| C1H5g24027 | 5:19,351,518-19,354,476 | + | C2H5g11353 | CX5g037040 | LOC_Os05g40260 | Os05g0481000 | - | Detail |
| C1H5g02182 | 5:19,361,852-19,371,211 | + | C2H5g07339 | CX5g038324 | LOC_Os05g40270 | Os05g0481100 | - | Detail |
| C1H5g03756 | 5:19,371,583-19,375,540 | - | C2H5g09907 | CX5g039343 | LOC_Os05g40280 | Os05g0481400 | - | Detail |
| C1H5g03902 | 5:19,387,314-19,390,883 | - | C2H5g20428 | CX5g038848 | LOC_Os05g40290 | Os05g0481500 | - | Detail |
| C1H5g10469 | 5:19,397,817-19,398,361 | + | C2H5g27797 | CX5g036753 | LOC_Os05g40300 | Os05g0481600 | - | Detail |
| C1H5g24805 | 5:19,401,091-19,403,618 | - | C2H5g06900 | CX5g037459 | LOC_Os05g40310 | Os05g0481700 | - | Detail |
| C1H5g08499 | 5:19,405,903-19,407,457 | + | C2H5g25296 | CX5g038701 | LOC_Os05g40320 | Os05g0481800 | - | Detail |
| C1H5g14646 | 5:19,410,985-19,413,294 | - | C2H5g16978 | CX5g037406 | LOC_Os05g40330 | Os05g0481900 | - | Detail |
| C1H5g20454 | 5:19,416,011-19,416,892 | - | C2H5g15740 | CX5g040861 | LOC_Os05g40360 | - | - | Detail |
| C1H5g22811 | 5:19,418,853-19,425,042 | + | C2H2g01315 | CX5g037195 | LOC_Os03g61860 | - | - | Detail |
| C1H5g07154 | 5:19,455,504-19,455,984 | + | C2H5g03648 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g08150 | 5:19,461,940-19,464,121 | + | C2H5g22897 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C1H5g11883 | 5:19,465,057-19,465,692 | + | C2H5g02533 | CX5g038624 | LOC_Os05g40400 | Os05g0482501 | - | Detail |
| C1H5g19898 | 5:19,474,299-19,474,571 | - | - | - | - | Os01g0817900 | - | Detail |
| C1H5g01703 | 5:19,474,390-19,478,928 | + | C2H5g19376 | CX5g040561 | LOC_Os05g40410 | Os05g0482600 | - | Detail |
| C1H5g12944 | 5:19,479,056-19,483,746 | - | C2H5g12661 | CX5g037367 | LOC_Os05g40420 | Os05g0482700 | - | Detail |
| C1H5g09268 | 5:19,543,083-19,544,643 | - | C2H5g26553 | CX5g039268 | LOC_Os05g40590 | Os05g0539300 | - | Detail |
| C1H5g23451 | 5:19,545,742-19,547,608 | - | C2H5g23995 | CX5g039268 | LOC_Os05g40610 | Os05g0539300 | - | Detail |
| C1H5g31019 | 5:19,548,410-19,549,771 | + | C2H5g16811 | CX5g039268 | LOC_Os05g40620 | Os05g0539300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037862 | 5:18,121,707-18,122,105 | - | C1H5g11953 | C2H5g08231 | LOC_Os05g36380 | Os05g0439750 | - | Detail |
| CX5g039319 | 5:18,134,346-18,135,329 | + | C1H5g19897 | C2H5g10880 | LOC_Os05g36900 | Os05g0440000 | - | Detail |
| CX5g039643 | 5:18,141,179-18,143,260 | - | C1H5g31606 | C2H5g07278 | LOC_Os05g36910 | Os05g0440100 | - | Detail |
| CX5g039509 | 5:18,143,626-18,143,808 | + | - | - | - | - | - | Detail |
| CX5g038860 | 5:18,145,517-18,147,478 | - | C1H5g15798 | C2H5g18409 | LOC_Os05g36920 | Os05g0440250 | OsHDA712 | Detail |
| CX5g037033 | 5:18,152,640-18,154,866 | - | C1H5g18373 | C2H5g22538 | LOC_Os05g36920 | Os05g0440250 | OsHDA712 | Detail |
| CX5g038922 | 5:18,164,566-18,169,718 | + | C1H5g03011 | C2H5g10085 | LOC_Os05g36960 | Os05g0440800 | - | Detail |
| CX5g036721 | 5:18,172,521-18,173,243 | + | C1H5g17274 | C2H5g22593 | LOC_Os05g36970 | Os05g0440900 | - | Detail |
| CX5g036937 | 5:18,187,726-18,188,499 | - | C1H5g20030 | C2H5g17186 | LOC_Os05g36990 | Os05g0441400 | - | Detail |
| CX5g039812 | 5:18,197,758-18,198,261 | + | C1H11g06384 | C2H5g09677 | LOC_Os05g37000 | Os05g0441750 | - | Detail |
| CX5g038885 | 5:18,200,565-18,201,044 | + | - | - | - | - | - | Detail |
| CX5g039966 | 5:18,208,691-18,208,840 | + | - | - | - | - | - | Detail |
| CX5g037991 | 5:18,213,591-18,213,995 | - | C1H5g03898 | C2H5g23100 | LOC_Os05g37030 | Os05g0442000 | - | Detail |
| CX5g037502 | 5:18,233,121-18,233,288 | + | - | - | - | - | - | Detail |
| CX5g037273 | 5:18,234,126-18,235,069 | - | C1H5g24883 | C2H5g23234 | LOC_Os05g37050 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| CX5g037170 | 5:18,238,524-18,239,340 | - | C1H5g10359 | C2H5g00840 | LOC_Os05g37060 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| CX5g040230 | 5:18,245,198-18,246,427 | - | C1H5g08191 | C2H5g00201 | LOC_Os05g37080 | Os05g0442700 | - | Detail |
| CX5g038652 | 5:18,248,917-18,249,730 | + | - | C2H5g12660 | - | - | - | Detail |
| CX5g039130 | 5:18,268,074-18,273,257 | - | C1H5g19867 | C2H5g28484 | LOC_Os05g37120 | Os05g0443300 | - | Detail |
| CX5g039104 | 5:18,276,237-18,278,825 | - | C1H5g09712 | C2H5g27590 | LOC_Os05g37130 | Os05g0443400 | - | Detail |