| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24146 | 3:902,277-905,502 | + | C1H3g21463 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C2H3g12012 | 3:905,885-908,766 | - | C1H3g16632 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C2H3g14284 | 3:910,317-914,198 | - | C1H3g08934 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| C2H3g02407 | 3:923,819-927,470 | - | C1H3g03441 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C2H3g11600 | 3:929,349-930,854 | - | C1H3g10934 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C2H3g16408 | 3:944,013-947,894 | + | C1H3g08539 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C2H3g18948 | 3:960,186-961,118 | + | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g18738 | 3:978,379-982,304 | - | C1H3g28264 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C2H3g23557 | 3:984,957-986,513 | - | C1H3g20047 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C2H3g04065 | 3:993,230-994,504 | + | C1H3g01141 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C2H3g16968 | 3:994,604-1,003,811 | - | C1H3g02111 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C2H3g23905 | 3:1,015,206-1,021,163 | + | C1H3g23785 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C2H3g27024 | 3:1,028,901-1,029,277 | + | C1H3g05090 | - | - | - | - | Detail |
| C2H3g24994 | 3:1,029,464-1,032,408 | + | C1H3g07706 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C2H3g11967 | 3:1,035,229-1,037,122 | - | C1H3g24387 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C2H3g05774 | 3:1,038,204-1,043,973 | - | C1H3g05611 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C2H3g15040 | 3:1,057,763-1,062,339 | - | C1H3g26838 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C2H3g28462 | 3:1,082,037-1,083,831 | - | C1H3g04456 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C2H3g16267 | 3:1,095,728-1,096,384 | + | C1H3g18665 | CX3g031045 | - | - | - | Detail |
| C2H3g19854 | 3:1,097,016-1,100,081 | + | C1H3g16789 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039484 | 5:17,998,488-18,003,839 | + | C1H5g16259 | C2H2g17690 | LOC_Os05g36070 | Os05g0436400 | - | Detail |
| CX5g038521 | 5:18,010,266-18,013,589 | + | C1H5g00945 | C2H5g24518 | LOC_Os05g36090 | Os05g0436900 | - | Detail |
| CX5g039880 | 5:18,024,443-18,024,613 | - | - | - | - | - | - | Detail |
| CX5g038881 | 5:18,029,901-18,030,593 | + | C1H5g30900 | C2H5g23889 | LOC_Os05g36100 | Os05g0437100 | - | Detail |
| CX5g040437 | 5:18,032,473-18,035,882 | + | C1H5g13619 | C2H5g26705 | LOC_Os05g36110 | Os05g0437200 | - | Detail |
| CX5g038248 | 5:18,037,274-18,042,284 | - | C1H5g30746 | C2H5g01872 | LOC_Os05g36120 | Os05g0437300 | OsPTB2 | Detail |
| CX5g037089 | 5:18,046,796-18,047,248 | - | C1H5g30728 | C2H5g07160 | LOC_Os05g36140 | Os05g0437401 | - | Detail |
| CX5g040008 | 5:18,049,291-18,052,138 | - | C1H5g12364 | C2H5g23446 | LOC_Os05g36150 | Os05g0437500 | - | Detail |
| CX5g038670 | 5:18,052,937-18,056,105 | + | C1H5g21578 | C2H5g27422 | LOC_Os05g36160 | Os05g0437700 | - | Detail |
| CX5g039734 | 5:18,064,722-18,065,063 | + | - | C2H5g25843 | - | - | - | Detail |
| CX5g036909 | 5:18,068,715-18,070,542 | - | C1H5g27479 | C2H5g29490 | LOC_Os05g36190 | Os05g0437900 | - | Detail |
| CX5g037659 | 5:18,080,326-18,081,633 | + | C1H5g31814 | C2H5g16485 | LOC_Os05g36260 | Os05g0438500 | - | Detail |
| CX5g036739 | 5:18,082,386-18,085,161 | - | C1H5g00387 | C2H5g12266 | LOC_Os05g36270 | Os05g0438600 | OscFBP2 | Detail |
| CX5g040190 | 5:18,088,690-18,089,100 | - | C1H5g01011 | C2H5g20770 | LOC_Os05g36280 | Os05g0489800 | OsCENH3 | Detail |
| CX5g040511 | 5:18,090,135-18,091,960 | - | C1H5g30330 | C2H5g27716 | LOC_Os05g36290 | Os05g0438800 | - | Detail |
| CX5g038952 | 5:18,099,180-18,099,395 | - | - | - | - | - | - | Detail |
| CX5g038867 | 5:18,104,056-18,104,709 | - | C1H5g26379 | C2H5g12466 | LOC_Os05g36310 | Os05g0439000 | - | Detail |
| CX5g038910 | 5:18,107,394-18,107,633 | - | - | - | - | - | - | Detail |
| CX5g039078 | 5:18,110,229-18,111,893 | - | C1H5g16929 | C2H5g14391 | LOC_Os05g36350 | Os05g0439300 | - | Detail |
| CX5g039474 | 5:18,117,645-18,119,003 | + | C1H5g23246 | C2H5g04868 | LOC_Os05g36360 | Os05g0439400 | PUB44, OsPUB44 | Detail |