| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039484 | 5:17,998,488-18,003,839 | + | C1H5g16259 | C2H2g17690 | LOC_Os05g36070 | Os05g0436400 | - | Detail |
| CX5g038521 | 5:18,010,266-18,013,589 | + | C1H5g00945 | C2H5g24518 | LOC_Os05g36090 | Os05g0436900 | - | Detail |
| CX5g039880 | 5:18,024,443-18,024,613 | - | - | - | - | - | - | Detail |
| CX5g038881 | 5:18,029,901-18,030,593 | + | C1H5g30900 | C2H5g23889 | LOC_Os05g36100 | Os05g0437100 | - | Detail |
| CX5g040437 | 5:18,032,473-18,035,882 | + | C1H5g13619 | C2H5g26705 | LOC_Os05g36110 | Os05g0437200 | - | Detail |
| CX5g038248 | 5:18,037,274-18,042,284 | - | C1H5g30746 | C2H5g01872 | LOC_Os05g36120 | Os05g0437300 | OsPTB2 | Detail |
| CX5g037089 | 5:18,046,796-18,047,248 | - | C1H5g30728 | C2H5g07160 | LOC_Os05g36140 | Os05g0437401 | - | Detail |
| CX5g040008 | 5:18,049,291-18,052,138 | - | C1H5g12364 | C2H5g23446 | LOC_Os05g36150 | Os05g0437500 | - | Detail |
| CX5g038670 | 5:18,052,937-18,056,105 | + | C1H5g21578 | C2H5g27422 | LOC_Os05g36160 | Os05g0437700 | - | Detail |
| CX5g039734 | 5:18,064,722-18,065,063 | + | - | C2H5g25843 | - | - | - | Detail |
| CX5g036909 | 5:18,068,715-18,070,542 | - | C1H5g27479 | C2H5g29490 | LOC_Os05g36190 | Os05g0437900 | - | Detail |
| CX5g037659 | 5:18,080,326-18,081,633 | + | C1H5g31814 | C2H5g16485 | LOC_Os05g36260 | Os05g0438500 | - | Detail |
| CX5g036739 | 5:18,082,386-18,085,161 | - | C1H5g00387 | C2H5g12266 | LOC_Os05g36270 | Os05g0438600 | OscFBP2 | Detail |
| CX5g040190 | 5:18,088,690-18,089,100 | - | C1H5g01011 | C2H5g20770 | LOC_Os05g36280 | Os05g0489800 | OsCENH3 | Detail |
| CX5g040511 | 5:18,090,135-18,091,960 | - | C1H5g30330 | C2H5g27716 | LOC_Os05g36290 | Os05g0438800 | - | Detail |
| CX5g038952 | 5:18,099,180-18,099,395 | - | - | - | - | - | - | Detail |
| CX5g038867 | 5:18,104,056-18,104,709 | - | C1H5g26379 | C2H5g12466 | LOC_Os05g36310 | Os05g0439000 | - | Detail |
| CX5g038910 | 5:18,107,394-18,107,633 | - | - | - | - | - | - | Detail |
| CX5g039078 | 5:18,110,229-18,111,893 | - | C1H5g16929 | C2H5g14391 | LOC_Os05g36350 | Os05g0439300 | - | Detail |
| CX5g039474 | 5:18,117,645-18,119,003 | + | C1H5g23246 | C2H5g04868 | LOC_Os05g36360 | Os05g0439400 | PUB44, OsPUB44 | Detail |