| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g29646 | 2:110,149-110,553 | - | C1H2g13220 | CX11g014422 | LOC_Os02g01160 | Os02g0101600 | - | Detail |
| C2H2g11074 | 2:111,543-121,718 | - | C1H2g30963 | CX2g019334 | LOC_Os02g01170 | Os02g0101700 | - | Detail |
| C2H2g10781 | 2:121,974-133,035 | - | C1H2g15406 | CX2g022192 | LOC_Os02g01180 | Os02g0101800 | - | Detail |
| C2H2g02133 | 2:137,837-138,712 | - | C1H2g24397 | CX2g022509 | LOC_Os02g01200 | Os02g0102000 | - | Detail |
| C2H2g24517 | 2:139,693-140,385 | - | C1H2g23055 | - | - | Os02g0102000 | - | Detail |
| C2H2g28066 | 2:144,616-146,489 | + | C1H2g14065 | CX2g020716 | LOC_Os02g01210 | Os02g0102200 | - | Detail |
| C2H2g20560 | 2:148,903-151,225 | + | C1H2g21251 | CX2g021896 | LOC_Os02g01220 | Os02g0102300 | STR5, OsHAC1;1, OsStr5 | Detail |
| C2H2g21540 | 2:151,284-154,276 | - | C1H2g15775 | CX2g019258 | LOC_Os02g01230 | Os02g0102400 | - | Detail |
| C2H2g20632 | 2:155,822-158,099 | + | C1H2g31400 | CX2g019481 | LOC_Os02g01245 | Os02g0102600 | - | Detail |
| C2H2g21359 | 2:160,640-161,262 | - | C1H2g10043 | CX2g023426 | LOC_Os02g01250 | Os02g0102700 | - | Detail |
| C2H2g17791 | 2:163,731-169,098 | + | C1H2g25884 | CX2g023621 | LOC_Os02g01270 | Os02g0102800 | - | Detail |
| C2H2g30002 | 2:171,313-176,361 | + | C1H2g05395 | CX2g020285 | LOC_Os02g01280 | Os02g0102900 | - | Detail |
| C2H2g21048 | 2:176,477-176,944 | - | C1H2g05563 | CX2g019812 | LOC_Os02g01290 | Os02g0103000 | - | Detail |
| C2H2g08778 | 2:178,262-178,813 | - | C1H2g05222 | CX2g022055 | LOC_Os02g01300 | Os02g0103200 | OsPMEI5 | Detail |
| C2H2g27196 | 2:180,195-180,797 | - | C1H2g08174 | CX2g021440 | LOC_Os02g01310 | Os02g0103300 | OsPMEI6 | Detail |
| C2H2g16016 | 2:187,255-188,841 | - | C1H2g30479 | CX2g021507 | LOC_Os02g01326 | Os02g0103500 | - | Detail |
| C2H2g03235 | 2:191,053-194,086 | - | C1H2g05195 | CX2g021507 | LOC_Os02g01326 | Os02g0103600 | Os5NG4 | Detail |
| C2H2g08514 | 2:195,526-196,939 | - | C1H2g27127 | CX2g019603 | LOC_Os02g01332 | Os02g0103700 | - | Detail |
| C2H2g13645 | 2:197,233-198,838 | - | C1H2g03431 | CX2g020827 | LOC_Os02g01340 | Os02g0103800 | - | Detail |
| C2H2g30264 | 2:201,155-205,701 | - | C1H2g11222 | CX2g018866 | LOC_Os02g01350 | Os02g0103900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003750 | 1:22,868,342-22,870,363 | + | C1H1g02990 | C2H1g02801 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| CX1g004521 | 1:22,878,204-22,878,488 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44370 | Os01g0635000 | - | Detail |
| CX1g004179 | 1:22,883,745-22,884,047 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44390 | Os01g0635200 | - | Detail |
| CX1g001073 | 1:22,887,327-22,890,691 | + | C1H1g03527 | C2H1g14029 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| CX1g002888 | 1:22,896,869-22,897,573 | - | C1H5g28773 | - | LOC_Os01g44430 | Os01g0635550 | - | Detail |
| CX1g005715 | 1:22,905,026-22,905,343 | + | - | - | - | Os01g0635800 | - | Detail |
| CX1g000864 | 1:22,915,705-22,917,252 | - | C1H5g00625 | - | LOC_Os01g44950 | - | - | Detail |
| CX1g003935 | 1:22,918,716-22,921,006 | - | C1H1g27414 | C2H1g18946 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| CX1g001605 | 1:22,930,534-22,934,408 | + | C1H1g00331 | C2H1g07403 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| CX1g007252 | 1:22,936,839-22,939,753 | - | C1H1g13180 | C2H1g22263 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| CX1g000311 | 1:22,943,367-22,944,213 | + | C1H1g21245 | C2H1g15078 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| CX1g003972 | 1:22,948,331-22,949,806 | + | C1H1g12410 | C2H1g05127 | LOC_Os01g45110 | Os01g0638000 | - | Detail |
| CX1g005242 | 1:22,967,756-22,969,246 | + | C1H1g11199 | C2H1g05127 | LOC_Os01g45140 | Os01g0638600 | UGT703A1 | Detail |
| CX1g000810 | 1:22,971,160-22,972,330 | - | C1H1g29459 | C2H1g21172 | - | Os01g0748150 | - | Detail |
| CX1g003936 | 1:22,974,875-22,975,069 | + | - | - | - | - | - | Detail |
| CX1g003479 | 1:22,990,292-22,990,912 | + | C1H1g25999 | C2H1g07012 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| CX1g000740 | 1:23,000,750-23,003,954 | + | C1H1g28061 | C2H1g28691 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| CX1g002505 | 1:23,004,685-23,010,620 | - | C1H1g08315 | C2H1g30211 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| CX1g001980 | 1:23,035,855-23,036,604 | + | - | - | LOC_Os01g45250 | Os01g0639600 | - | Detail |
| CX1g002383 | 1:23,047,238-23,055,345 | + | C1H1g11479 | C2H1g17536 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |