| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g25459 | 11:17,211,736-17,213,139 | - | C1H11g25704 | CX11g013068 | LOC_Os11g32759 | Os11g0532900 | - | Detail |
| C2H11g09864 | 11:17,226,961-17,230,317 | + | C1H11g24751 | CX11g014034 | LOC_Os11g32780 | Os11g0532200 | - | Detail |
| C2H11g17183 | 11:17,239,637-17,242,304 | + | C1H11g07053 | CX11g014224 | LOC_Os11g32810 | Os11g0532600 | - | Detail |
| C2H11g16608 | 11:17,247,861-17,248,518 | - | C1H11g07053 | CX11g014224 | LOC_Os11g32810 | Os11g0532600 | - | Detail |
| C2H11g15663 | 11:17,257,799-17,264,673 | + | C1H11g10062 | CX11g012680 | LOC_Os11g32900 | Os11g0533500 | - | Detail |
| C2H11g03729 | 11:17,267,096-17,267,587 | + | - | CX11g011475 | LOC_Os11g32890 | Os11g0533400 | - | Detail |
| C2H11g16685 | 11:17,268,561-17,275,890 | + | C1H11g19167 | CX11g014232 | LOC_Os11g32880 | Os11g0533100 | - | Detail |
| C2H11g15203 | 11:17,277,753-17,278,355 | - | - | CX11g011078 | - | - | - | Detail |
| C2H11g26926 | 11:17,282,860-17,283,747 | + | - | CX11g013359 | LOC_Os11g32950 | Os11g0534100 | - | Detail |
| C2H11g04095 | 11:17,289,139-17,291,056 | - | C1H11g12423 | CX11g012811 | LOC_Os11g32960 | Os11g0534300 | - | Detail |
| C2H11g21032 | 11:17,304,830-17,305,237 | + | - | CX11g014906 | LOC_Os11g33000 | Os11g0535525 | - | Detail |
| C2H11g00253 | 11:17,319,235-17,320,302 | + | - | CX11g013466 | LOC_Os11g33030 | - | - | Detail |
| C2H11g19750 | 11:17,330,191-17,331,024 | - | - | CX11g014244 | LOC_Os11g33050 | - | - | Detail |
| C2H11g18443 | 11:17,347,644-17,351,477 | - | C1H11g20682 | CX11g013221 | LOC_Os11g33090 | Os11g0536800 | - | Detail |
| C2H11g08861 | 11:17,355,874-17,356,476 | + | C1H11g23306 | CX11g011430 | LOC_Os11g33100 | Os11g0537300 | - | Detail |
| C2H11g14109 | 11:17,359,154-17,360,767 | + | - | CX11g011430 | LOC_Os11g33100 | Os11g0537300 | - | Detail |
| C2H11g06443 | 11:17,361,388-17,362,056 | + | C1H11g02477 | CX11g014344 | LOC_Os11g33110 | Os11g0537350 | - | Detail |
| C2H11g23754 | 11:17,364,070-17,371,788 | - | C1H11g20153 | CX11g013985 | LOC_Os11g33120 | Os11g0537400 | OsRbohI | Detail |
| C2H11g21288 | 11:17,415,982-17,417,661 | + | C1H11g29963 | CX11g014853 | LOC_Os11g33190 | Os11g0538400 | - | Detail |
| C2H11g18474 | 11:17,429,092-17,435,587 | + | C1H11g10760 | CX11g014853 | LOC_Os11g33240 | Os11g0538900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003750 | 1:22,868,342-22,870,363 | + | C1H1g02990 | C2H1g02801 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| CX1g004521 | 1:22,878,204-22,878,488 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44370 | Os01g0635000 | - | Detail |
| CX1g004179 | 1:22,883,745-22,884,047 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44390 | Os01g0635200 | - | Detail |
| CX1g001073 | 1:22,887,327-22,890,691 | + | C1H1g03527 | C2H1g14029 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| CX1g002888 | 1:22,896,869-22,897,573 | - | C1H5g28773 | - | LOC_Os01g44430 | Os01g0635550 | - | Detail |
| CX1g005715 | 1:22,905,026-22,905,343 | + | - | - | - | Os01g0635800 | - | Detail |
| CX1g000864 | 1:22,915,705-22,917,252 | - | C1H5g00625 | - | LOC_Os01g44950 | - | - | Detail |
| CX1g003935 | 1:22,918,716-22,921,006 | - | C1H1g27414 | C2H1g18946 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| CX1g001605 | 1:22,930,534-22,934,408 | + | C1H1g00331 | C2H1g07403 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| CX1g007252 | 1:22,936,839-22,939,753 | - | C1H1g13180 | C2H1g22263 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| CX1g000311 | 1:22,943,367-22,944,213 | + | C1H1g21245 | C2H1g15078 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| CX1g003972 | 1:22,948,331-22,949,806 | + | C1H1g12410 | C2H1g05127 | LOC_Os01g45110 | Os01g0638000 | - | Detail |
| CX1g005242 | 1:22,967,756-22,969,246 | + | C1H1g11199 | C2H1g05127 | LOC_Os01g45140 | Os01g0638600 | UGT703A1 | Detail |
| CX1g000810 | 1:22,971,160-22,972,330 | - | C1H1g29459 | C2H1g21172 | - | Os01g0748150 | - | Detail |
| CX1g003936 | 1:22,974,875-22,975,069 | + | - | - | - | - | - | Detail |
| CX1g003479 | 1:22,990,292-22,990,912 | + | C1H1g25999 | C2H1g07012 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| CX1g000740 | 1:23,000,750-23,003,954 | + | C1H1g28061 | C2H1g28691 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| CX1g002505 | 1:23,004,685-23,010,620 | - | C1H1g08315 | C2H1g30211 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| CX1g001980 | 1:23,035,855-23,036,604 | + | - | - | LOC_Os01g45250 | Os01g0639600 | - | Detail |
| CX1g002383 | 1:23,047,238-23,055,345 | + | C1H1g11479 | C2H1g17536 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |