| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g18331 | 7:18,636,476-18,640,098 | - | C2H7g27236 | CX7g049208 | LOC_Os07g36820 | - | - | Detail |
| C1H7g22282 | 7:18,650,041-18,651,273 | - | C2H7g15216 | CX7g047800 | LOC_Os07g36840 | Os07g0554200 | - | Detail |
| C1H7g21745 | 7:18,653,333-18,658,106 | + | C2H7g15216 | CX7g047800 | LOC_Os07g36870 | Os07g0554500 | - | Detail |
| C1H7g10823 | 7:18,658,248-18,659,867 | + | C2H7g15216 | CX7g047800 | LOC_Os07g36880 | Os07g0554600 | - | Detail |
| C1H7g15464 | 7:18,661,632-18,663,177 | - | C2H7g24312 | CX7g047969 | LOC_Os07g36890 | - | - | Detail |
| C1H7g18394 | 7:18,663,821-18,666,280 | - | C2H7g23696 | - | LOC_Os07g36900 | - | - | Detail |
| C1H7g30589 | 7:18,677,285-18,679,886 | + | C2H7g15216 | CX7g047800 | LOC_Os07g36910 | Os07g0554900 | - | Detail |
| C1H7g13032 | 7:18,682,997-18,684,364 | + | C2H7g15216 | CX7g047800 | LOC_Os07g36920 | Os07g0555000 | OsFbox394 | Detail |
| C1H7g12694 | 7:18,687,441-18,688,640 | + | C2H7g24405 | CX7g047657 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| C1H7g28218 | 7:18,693,597-18,694,376 | + | C2H7g24405 | CX7g047657 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| C1H7g30162 | 7:18,709,494-18,710,240 | + | C2H7g12564 | CX7g047800 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| C1H7g20049 | 7:18,720,039-18,721,229 | + | C2H7g12564 | CX7g047800 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| C1H7g29793 | 7:18,724,185-18,732,120 | + | C2H7g05157 | CX7g047657 | LOC_Os07g36940 | Os07g0555200 | - | Detail |
| C1H7g26265 | 7:18,733,150-18,735,043 | + | C2H7g02404 | CX7g047657 | LOC_Os07g36950 | Os07g0555300 | - | Detail |
| C1H7g19438 | 7:18,737,127-18,737,387 | + | C2H7g15216 | CX7g047800 | LOC_Os07g36910 | Os07g0554900 | - | Detail |
| C1H7g28758 | 7:18,737,454-18,738,413 | + | C2H7g02404 | CX7g047657 | LOC_Os07g36960 | Os07g0555400 | - | Detail |
| C1H7g08217 | 7:18,769,318-18,769,851 | + | C2H7g11204 | CX7g048385 | - | - | - | Detail |
| C1H7g04934 | 7:18,771,281-18,773,728 | - | C2H7g18239 | CX7g049925 | LOC_Os07g37010 | Os07g0556000 | - | Detail |
| C1H7g25795 | 7:18,783,697-18,786,256 | + | C2H7g16422 | CX7g047381 | LOC_Os07g37030 | Os07g0556200 | - | Detail |
| C1H7g15212 | 7:18,787,257-18,788,393 | - | C2H7g19187 | CX7g047063 | LOC_Os07g37040 | Os07g0556300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003750 | 1:22,868,342-22,870,363 | + | C1H1g02990 | C2H1g02801 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| CX1g004521 | 1:22,878,204-22,878,488 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44370 | Os01g0635000 | - | Detail |
| CX1g004179 | 1:22,883,745-22,884,047 | + | C1H1g22221 | C2H1g02642 | LOC_Os01g44390 | Os01g0635200 | - | Detail |
| CX1g001073 | 1:22,887,327-22,890,691 | + | C1H1g03527 | C2H1g14029 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| CX1g002888 | 1:22,896,869-22,897,573 | - | C1H5g28773 | - | LOC_Os01g44430 | Os01g0635550 | - | Detail |
| CX1g005715 | 1:22,905,026-22,905,343 | + | - | - | - | Os01g0635800 | - | Detail |
| CX1g000864 | 1:22,915,705-22,917,252 | - | C1H5g00625 | - | LOC_Os01g44950 | - | - | Detail |
| CX1g003935 | 1:22,918,716-22,921,006 | - | C1H1g27414 | C2H1g18946 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| CX1g001605 | 1:22,930,534-22,934,408 | + | C1H1g00331 | C2H1g07403 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| CX1g007252 | 1:22,936,839-22,939,753 | - | C1H1g13180 | C2H1g22263 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| CX1g000311 | 1:22,943,367-22,944,213 | + | C1H1g21245 | C2H1g15078 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| CX1g003972 | 1:22,948,331-22,949,806 | + | C1H1g12410 | C2H1g05127 | LOC_Os01g45110 | Os01g0638000 | - | Detail |
| CX1g005242 | 1:22,967,756-22,969,246 | + | C1H1g11199 | C2H1g05127 | LOC_Os01g45140 | Os01g0638600 | UGT703A1 | Detail |
| CX1g000810 | 1:22,971,160-22,972,330 | - | C1H1g29459 | C2H1g21172 | - | Os01g0748150 | - | Detail |
| CX1g003936 | 1:22,974,875-22,975,069 | + | - | - | - | - | - | Detail |
| CX1g003479 | 1:22,990,292-22,990,912 | + | C1H1g25999 | C2H1g07012 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| CX1g000740 | 1:23,000,750-23,003,954 | + | C1H1g28061 | C2H1g28691 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| CX1g002505 | 1:23,004,685-23,010,620 | - | C1H1g08315 | C2H1g30211 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| CX1g001980 | 1:23,035,855-23,036,604 | + | - | - | LOC_Os01g45250 | Os01g0639600 | - | Detail |
| CX1g002383 | 1:23,047,238-23,055,345 | + | C1H1g11479 | C2H1g17536 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |