| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26883 | 3:30,547,135-30,556,048 | - | C1H3g06142 | CX3g030682 | LOC_Os03g58600 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| C2H3g21138 | 3:30,562,282-30,563,610 | - | C1H3g31832 | CX3g025373 | LOC_Os03g58610 | Os03g0800400 | - | Detail |
| C2H3g28024 | 3:30,564,726-30,567,455 | - | C1H3g31832 | CX3g025373 | LOC_Os03g58620 | Os03g0800500 | - | Detail |
| C2H3g18555 | 3:30,568,209-30,570,049 | - | C1H3g31423 | CX3g026714 | LOC_Os03g58630 | Os03g0800700 | - | Detail |
| C2H3g28838 | 3:30,570,586-30,579,205 | - | C1H3g10764 | CX3g026264 | LOC_Os03g58640 | Os03g0800800 | - | Detail |
| C2H3g01155 | 3:30,580,828-30,581,365 | + | C1H3g02255 | - | - | Os03g0800900 | - | Detail |
| C2H3g25793 | 3:30,581,538-30,582,987 | + | C1H3g00648 | CX3g026772 | LOC_Os03g58690 | Os03g0801500 | - | Detail |
| C2H3g23292 | 3:30,584,427-30,584,737 | - | - | CX3g029458 | - | - | - | Detail |
| C2H3g03346 | 3:30,584,935-30,593,066 | + | C1H3g06085 | CX3g030423 | LOC_Os03g58700 | Os03g0801600 | - | Detail |
| C2H3g21897 | 3:30,593,373-30,596,684 | - | C1H3g07389 | CX3g026599 | LOC_Os03g58710 | Os03g0801700 | - | Detail |
| C2H3g02470 | 3:30,597,752-30,604,986 | + | C1H3g31741 | CX3g026853 | LOC_Os03g58720 | Os03g0801800 | - | Detail |
| C2H3g24055 | 3:30,607,479-30,608,920 | + | C1H3g13444 | CX3g028194 | LOC_Os03g58740 | Os03g0801900 | - | Detail |
| C2H3g06737 | 3:30,628,338-30,628,673 | + | C1H3g24645 | CX3g027259 | LOC_Os03g58764 | - | - | Detail |
| C2H3g22987 | 3:30,630,696-30,637,023 | - | C1H3g27952 | CX3g026467 | LOC_Os03g58780 | Os03g0802300 | - | Detail |
| C2H3g07093 | 3:30,645,433-30,647,570 | + | C1H3g23323 | CX3g029310 | LOC_Os03g58800 | Os03g0802600 | - | Detail |
| C2H3g04258 | 3:30,647,332-30,651,291 | - | C1H3g23165 | CX3g031125 | LOC_Os03g58810 | Os03g0802700 | - | Detail |
| C2H3g14685 | 3:30,651,840-30,658,004 | - | C1H3g24318 | CX3g026858 | LOC_Os03g58820 | Os03g0802800 | - | Detail |
| C2H3g17538 | 3:30,658,053-30,658,757 | - | - | - | - | - | - | Detail |
| C2H3g03398 | 3:30,658,875-30,662,606 | - | C1H3g09968 | CX3g029318 | LOC_Os03g58830 | Os03g0802900 | - | Detail |
| C2H3g17483 | 3:30,664,745-30,667,942 | + | C1H3g24192 | CX3g027749 | LOC_Os03g58840 | Os03g0803000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037167 | 5:17,652,034-17,653,919 | - | C1H5g07626 | C2H5g20250 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| CX5g039306 | 5:17,654,791-17,654,994 | - | - | - | - | - | - | Detail |
| CX5g038981 | 5:17,655,119-17,658,155 | - | C1H5g00266 | C2H5g25245 | LOC_Os05g35274 | Os05g0427300 | - | Detail |
| CX5g036951 | 5:17,660,197-17,662,347 | - | C1H5g08356 | C2H5g08943 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| CX5g040179 | 5:17,670,408-17,673,604 | - | C1H5g09774 | C2H5g12313 | LOC_Os05g26926 | Os05g0427900 | - | Detail |
| CX5g038636 | 5:17,678,499-17,678,714 | - | C1H5g05769 | C2H5g19904 | LOC_Os05g35350 | Os05g0428000 | - | Detail |
| CX5g041033 | 5:17,680,618-17,695,298 | - | C1H5g30475 | C2H5g10232 | LOC_Os05g35360 | Os05g0428100 | - | Detail |
| CX5g038421 | 5:17,710,560-17,713,097 | - | C1H5g21222 | C2H5g07719 | LOC_Os05g35380 | Os05g0428400 | - | Detail |
| CX5g037881 | 5:17,720,763-17,720,915 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g037691 | 5:17,725,038-17,727,083 | - | C1H5g31639 | C2H5g26795 | LOC_Os05g35400 | Os05g0428600 | OsBiP4 | Detail |
| CX5g039770 | 5:17,728,859-17,734,487 | - | C1H5g14970 | C2H5g29329 | LOC_Os05g35410 | Os05g0428700 | OsAKT2, OsK3.1 | Detail |
| CX5g040557 | 5:17,737,060-17,737,518 | - | C1H5g12172 | C2H5g29672 | - | Os05g0194900 | - | Detail |
| CX5g039389 | 5:17,737,762-17,738,190 | - | C1H5g22889 | C2H5g10638 | LOC_Os05g35430 | Os05g0500000 | - | Detail |
| CX5g040362 | 5:17,748,104-17,751,437 | - | C1H5g17005 | C2H5g16540 | LOC_Os05g35440 | Os05g0429000 | - | Detail |
| CX5g038601 | 5:17,761,784-17,764,211 | - | C1H5g22440 | C2H5g17304 | LOC_Os05g35460 | Os05g0429400 | OsSec14-15 | Detail |
| CX5g040206 | 5:17,778,716-17,779,866 | - | C1H5g14294 | C2H5g21445 | LOC_Os05g35470 | Os05g0429500 | - | Detail |
| CX5g040258 | 5:17,781,851-17,784,265 | - | C1H5g15484 | C2H5g17599 | LOC_Os05g35480 | Os05g0429700 | - | Detail |
| CX5g040733 | 5:17,801,295-17,802,177 | - | C1H5g07206 | C2H5g19149 | LOC_Os05g35500 | Os05g0429900 | Os2R_MYB55 | Detail |
| CX5g040520 | 5:17,814,440-17,816,540 | + | - | - | - | - | - | Detail |
| CX5g040159 | 5:17,817,794-17,820,630 | + | C1H5g31878 | C2H5g03708 | LOC_Os05g35520 | Os05g0430200 | WSL8, OsdNK1 | Detail |