| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02809 | 3:2,382,989-2,384,382 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g07135 | 3:2,384,709-2,385,099 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g29786 | 3:2,389,090-2,391,982 | + | C1H3g27908 | CX3g029578 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| C2H3g29884 | 3:2,395,079-2,395,626 | + | C1H3g00677 | - | - | - | - | Detail |
| C2H3g01040 | 3:2,400,513-2,401,439 | - | C1H3g00185 | CX3g030199 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| C2H3g29045 | 3:2,408,018-2,408,917 | - | C1H3g00155 | CX3g028233 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| C2H3g13096 | 3:2,424,730-2,425,155 | + | C1H3g19498 | CX3g030128 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| C2H3g29028 | 3:2,427,358-2,428,983 | + | C1H3g28178 | CX3g030522 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| C2H3g30077 | 3:2,430,807-2,432,390 | - | C1H3g29432 | CX3g029750 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| C2H3g00543 | 3:2,434,580-2,435,837 | + | C1H3g22703 | - | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g05251 | 3:2,436,029-2,436,640 | + | C1H3g31371 | CX3g024968 | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g19570 | 3:2,444,751-2,445,075 | + | C1H3g21603 | - | - | Os03g0150700 | - | Detail |
| C2H3g28429 | 3:2,446,347-2,447,933 | - | C1H3g04203 | CX3g028575 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| C2H3g24713 | 3:2,452,468-2,457,529 | - | C1H3g13409 | CX3g030168 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| C2H3g23634 | 3:2,461,313-2,469,594 | + | C1H3g18077 | CX3g028756 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |
| C2H3g25123 | 3:2,469,992-2,470,303 | - | C1H3g12618 | CX3g027574 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| C2H3g19949 | 3:2,472,091-2,472,774 | - | C1H3g18071 | CX3g029524 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| C2H3g16820 | 3:2,473,799-2,479,561 | + | C1H3g05811 | CX3g027544 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| C2H3g19649 | 3:2,480,098-2,484,362 | - | C1H3g17815 | CX3g029565 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| C2H3g15451 | 3:2,485,113-2,488,078 | - | C1H3g06798 | CX3g027324 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037167 | 5:17,652,034-17,653,919 | - | C1H5g07626 | C2H5g20250 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| CX5g039306 | 5:17,654,791-17,654,994 | - | - | - | - | - | - | Detail |
| CX5g038981 | 5:17,655,119-17,658,155 | - | C1H5g00266 | C2H5g25245 | LOC_Os05g35274 | Os05g0427300 | - | Detail |
| CX5g036951 | 5:17,660,197-17,662,347 | - | C1H5g08356 | C2H5g08943 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| CX5g040179 | 5:17,670,408-17,673,604 | - | C1H5g09774 | C2H5g12313 | LOC_Os05g26926 | Os05g0427900 | - | Detail |
| CX5g038636 | 5:17,678,499-17,678,714 | - | C1H5g05769 | C2H5g19904 | LOC_Os05g35350 | Os05g0428000 | - | Detail |
| CX5g041033 | 5:17,680,618-17,695,298 | - | C1H5g30475 | C2H5g10232 | LOC_Os05g35360 | Os05g0428100 | - | Detail |
| CX5g038421 | 5:17,710,560-17,713,097 | - | C1H5g21222 | C2H5g07719 | LOC_Os05g35380 | Os05g0428400 | - | Detail |
| CX5g037881 | 5:17,720,763-17,720,915 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g037691 | 5:17,725,038-17,727,083 | - | C1H5g31639 | C2H5g26795 | LOC_Os05g35400 | Os05g0428600 | OsBiP4 | Detail |
| CX5g039770 | 5:17,728,859-17,734,487 | - | C1H5g14970 | C2H5g29329 | LOC_Os05g35410 | Os05g0428700 | OsAKT2, OsK3.1 | Detail |
| CX5g040557 | 5:17,737,060-17,737,518 | - | C1H5g12172 | C2H5g29672 | - | Os05g0194900 | - | Detail |
| CX5g039389 | 5:17,737,762-17,738,190 | - | C1H5g22889 | C2H5g10638 | LOC_Os05g35430 | Os05g0500000 | - | Detail |
| CX5g040362 | 5:17,748,104-17,751,437 | - | C1H5g17005 | C2H5g16540 | LOC_Os05g35440 | Os05g0429000 | - | Detail |
| CX5g038601 | 5:17,761,784-17,764,211 | - | C1H5g22440 | C2H5g17304 | LOC_Os05g35460 | Os05g0429400 | OsSec14-15 | Detail |
| CX5g040206 | 5:17,778,716-17,779,866 | - | C1H5g14294 | C2H5g21445 | LOC_Os05g35470 | Os05g0429500 | - | Detail |
| CX5g040258 | 5:17,781,851-17,784,265 | - | C1H5g15484 | C2H5g17599 | LOC_Os05g35480 | Os05g0429700 | - | Detail |
| CX5g040733 | 5:17,801,295-17,802,177 | - | C1H5g07206 | C2H5g19149 | LOC_Os05g35500 | Os05g0429900 | Os2R_MYB55 | Detail |
| CX5g040520 | 5:17,814,440-17,816,540 | + | - | - | - | - | - | Detail |
| CX5g040159 | 5:17,817,794-17,820,630 | + | C1H5g31878 | C2H5g03708 | LOC_Os05g35520 | Os05g0430200 | WSL8, OsdNK1 | Detail |