| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15230 | 5:23,167,027-23,168,937 | + | - | - | - | - | - | Detail |
| C2H5g04318 | 5:23,171,248-23,173,305 | + | C1H5g03876 | CX5g037582 | LOC_Os05g48320 | Os05g0557000 | - | Detail |
| C2H5g27989 | 5:23,173,820-23,177,222 | - | C1H5g30394 | CX5g039564 | LOC_Os05g48330 | Os05g0557100 | - | Detail |
| C2H5g12748 | 5:23,183,844-23,189,167 | + | C1H5g07029 | CX5g039452 | LOC_Os05g48340 | Os05g0557200 | - | Detail |
| C2H5g05831 | 5:23,191,712-23,195,067 | - | C1H5g15077 | CX5g040314 | LOC_Os05g48360 | Os05g0557400 | - | Detail |
| C2H5g12137 | 5:23,196,911-23,199,613 | - | C1H5g30428 | CX5g038427 | LOC_Os05g48370 | Os05g0557500 | - | Detail |
| C2H5g10055 | 5:23,200,501-23,204,959 | - | C1H5g24254 | CX5g039930 | LOC_Os05g48380 | Os05g0557600 | - | Detail |
| C2H5g25746 | 5:23,206,512-23,214,667 | - | C1H5g01069 | CX5g041031 | LOC_Os05g48390 | Os05g0557700 | LTN1, PHO2.2 | Detail |
| C2H5g26773 | 5:23,222,969-23,225,459 | - | C1H5g26384 | CX5g036872 | LOC_Os05g48410 | Os05g0557800 | - | Detail |
| C2H5g03768 | 5:23,226,059-23,229,161 | - | C1H5g08534 | CX5g040711 | LOC_Os05g48416 | Os05g0557900 | - | Detail |
| C2H5g19124 | 5:23,230,795-23,232,045 | - | C1H5g13071 | CX5g037638 | LOC_Os05g48422 | Os05g0558000 | - | Detail |
| C2H5g11101 | 5:23,243,006-23,243,791 | - | C1H5g24420 | CX5g040952 | LOC_Os05g48489 | Os05g0457800 | - | Detail |
| C2H5g00508 | 5:23,244,106-23,250,113 | + | C1H5g06098 | CX5g037184 | LOC_Os05g48450 | Os05g0558400 | OsBCAT4 | Detail |
| C2H5g28108 | 5:23,255,492-23,255,881 | - | C1H5g05403 | CX9g057071 | LOC_Os05g48480 | Os05g0353100 | - | Detail |
| C2H5g13714 | 5:23,258,767-23,263,640 | + | C1H5g08257 | CX5g039815 | LOC_Os05g48500 | Os05g0558800 | - | Detail |
| C2H5g18563 | 5:23,266,183-23,272,680 | + | C1H5g19475 | CX5g038975 | LOC_Os05g48510 | Os05g0558900 | - | Detail |
| C2H5g19891 | 5:23,272,885-23,274,753 | - | C1H5g12218 | CX5g038139 | LOC_Os05g48520 | Os05g0559000 | - | Detail |
| C2H5g17680 | 5:23,288,779-23,289,265 | - | C1H5g10473 | CX5g039256 | LOC_Os05g48570 | Os05g0559316 | - | Detail |
| C2H5g06270 | 5:23,294,102-23,295,184 | - | C1H5g08715 | CX5g038826 | LOC_Os05g48580 | Os05g0559350 | - | Detail |
| C2H5g14650 | 5:23,300,524-23,304,607 | - | C1H5g27784 | CX5g039828 | LOC_Os05g48590 | Os05g0559400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038348 | 5:17,498,659-17,500,572 | - | C1H5g25033 | C2H5g13079 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| CX5g038944 | 5:17,509,374-17,509,535 | + | - | C2H5g26699 | LOC_Os01g65810 | - | - | Detail |
| CX5g036706 | 5:17,516,676-17,518,449 | + | C1H5g20302 | C2H5g08477 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| CX5g039198 | 5:17,525,916-17,527,511 | - | C1H5g19880 | C2H5g17702 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| CX5g040153 | 5:17,536,717-17,537,217 | - | - | - | LOC_Os05g33370 | - | - | Detail |
| CX5g038130 | 5:17,537,806-17,538,267 | + | C1H5g26014 | C2H5g01235 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| CX5g039042 | 5:17,541,235-17,544,449 | - | C1H5g09390 | C2H5g19210 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| CX5g037394 | 5:17,549,550-17,553,307 | - | C1H5g14947 | C2H5g11670 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| CX5g039904 | 5:17,559,050-17,559,766 | + | C1H5g27001 | - | - | - | - | Detail |
| CX5g037197 | 5:17,566,419-17,566,679 | + | - | - | - | Os05g0425600 | - | Detail |
| CX5g040956 | 5:17,569,467-17,571,704 | + | C1H5g09442 | C2H5g20022 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| CX5g040098 | 5:17,583,225-17,585,129 | + | C1H5g25816 | C2H5g16085 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| CX5g039886 | 5:17,586,124-17,588,248 | - | C1H5g10910 | C2H5g06015 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| CX5g040670 | 5:17,592,446-17,595,534 | + | C1H5g26456 | C2H5g25451 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| CX5g040243 | 5:17,596,344-17,600,400 | - | C1H5g31800 | C2H5g25115 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| CX5g037404 | 5:17,624,065-17,625,507 | - | - | - | - | - | - | Detail |
| CX5g037277 | 5:17,629,811-17,631,588 | + | C1H5g30451 | C2H5g27233 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| CX5g037288 | 5:17,633,950-17,634,555 | + | C1H5g08438 | C2H5g06354 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| CX5g039954 | 5:17,643,972-17,644,234 | + | - | - | - | - | - | Detail |
| CX5g040123 | 5:17,646,818-17,648,003 | + | C1H5g22553 | C2H5g02568 | LOC_Os05g35260 | Os05g0427100 | - | Detail |