| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g18960 | 11:5,188,420-5,188,976 | + | C2H11g21746 | CX11g013290 | - | - | - | Detail |
| C1H11g07788 | 11:5,193,481-5,201,581 | - | C2H11g20341 | CX11g014191 | LOC_Os11g10710 | Os11g0212900 | - | Detail |
| C1H11g30248 | 11:5,208,189-5,216,455 | - | C2H11g24687 | CX11g014810 | LOC_Os11g10710 | Os11g0213000 | - | Detail |
| C1H11g10112 | 11:5,236,161-5,237,573 | + | C2H11g09361 | CX11g013745 | LOC_Os11g10740 | Os11g0213500 | SMK1, Os_Smk1, Os_SMK1 | Detail |
| C1H11g01119 | 11:5,239,903-5,243,813 | - | C2H11g07610 | CX11g012241 | LOC_Os11g10750 | Os11g0213600 | - | Detail |
| C1H11g20938 | 11:5,248,080-5,258,423 | - | C2H11g19915 | CX11g013547 | LOC_Os11g10760 | Os11g0213700 | - | Detail |
| C1H11g00151 | 11:5,261,531-5,265,870 | - | C2H11g18882 | CX11g012794 | LOC_Os11g10780 | Os11g0214001 | - | Detail |
| C1H11g03580 | 11:5,284,812-5,285,144 | + | C2H11g09301 | CX11g012389 | LOC_Os11g10790 | Os11g0214100 | - | Detail |
| C1H11g26930 | 11:5,294,946-5,295,545 | + | C2H11g02991 | CX11g011730 | LOC_Os11g10800 | Os11g0214400 | - | Detail |
| C1H11g04664 | 11:5,305,263-5,306,434 | + | C2H11g20539 | - | - | - | - | Detail |
| C1H11g16980 | 11:5,311,004-5,312,802 | + | C2H11g12965 | CX11g012389 | LOC_Os11g10850 | Os11g0214900 | - | Detail |
| C1H11g15831 | 11:5,319,469-5,320,014 | + | C2H11g14997 | CX11g014332 | LOC_Os11g10870 | Os11g0215100 | - | Detail |
| C1H11g26395 | 11:5,321,538-5,322,125 | + | C2H11g29088 | CX11g013117 | LOC_Os11g10880 | - | - | Detail |
| C1H11g16096 | 11:5,325,219-5,325,784 | - | C2H11g11630 | CX11g014986 | LOC_Os11g10890 | Os11g0215300 | - | Detail |
| C1H11g05645 | 11:5,328,313-5,331,340 | - | C2H11g14614 | CX11g014057 | LOC_Os11g10910 | Os11g0215400 | - | Detail |
| C1H11g27455 | 11:5,337,859-5,344,040 | - | C2H11g08047 | CX11g012038 | LOC_Os11g10920 | - | - | Detail |
| C1H11g08086 | 11:5,355,209-5,360,908 | + | C2H11g23543 | CX11g013871 | LOC_Os11g10980 | Os11g0216000 | - | Detail |
| C1H11g21479 | 11:5,361,280-5,362,438 | - | C2H11g16618 | CX11g012953 | LOC_Os11g10990 | Os11g0216100 | - | Detail |
| C1H11g02394 | 11:5,364,010-5,369,569 | - | C2H11g28382 | CX11g011499 | LOC_Os11g11000 | Os11g0216300 | - | Detail |
| C1H11g15280 | 11:5,385,836-5,388,959 | - | C2H11g15592 | CX11g013543 | LOC_Os11g11020 | Os11g0216400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038348 | 5:17,498,659-17,500,572 | - | C1H5g25033 | C2H5g13079 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| CX5g038944 | 5:17,509,374-17,509,535 | + | - | C2H5g26699 | LOC_Os01g65810 | - | - | Detail |
| CX5g036706 | 5:17,516,676-17,518,449 | + | C1H5g20302 | C2H5g08477 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| CX5g039198 | 5:17,525,916-17,527,511 | - | C1H5g19880 | C2H5g17702 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| CX5g040153 | 5:17,536,717-17,537,217 | - | - | - | LOC_Os05g33370 | - | - | Detail |
| CX5g038130 | 5:17,537,806-17,538,267 | + | C1H5g26014 | C2H5g01235 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| CX5g039042 | 5:17,541,235-17,544,449 | - | C1H5g09390 | C2H5g19210 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| CX5g037394 | 5:17,549,550-17,553,307 | - | C1H5g14947 | C2H5g11670 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| CX5g039904 | 5:17,559,050-17,559,766 | + | C1H5g27001 | - | - | - | - | Detail |
| CX5g037197 | 5:17,566,419-17,566,679 | + | - | - | - | Os05g0425600 | - | Detail |
| CX5g040956 | 5:17,569,467-17,571,704 | + | C1H5g09442 | C2H5g20022 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| CX5g040098 | 5:17,583,225-17,585,129 | + | C1H5g25816 | C2H5g16085 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| CX5g039886 | 5:17,586,124-17,588,248 | - | C1H5g10910 | C2H5g06015 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| CX5g040670 | 5:17,592,446-17,595,534 | + | C1H5g26456 | C2H5g25451 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| CX5g040243 | 5:17,596,344-17,600,400 | - | C1H5g31800 | C2H5g25115 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| CX5g037404 | 5:17,624,065-17,625,507 | - | - | - | - | - | - | Detail |
| CX5g037277 | 5:17,629,811-17,631,588 | + | C1H5g30451 | C2H5g27233 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| CX5g037288 | 5:17,633,950-17,634,555 | + | C1H5g08438 | C2H5g06354 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| CX5g039954 | 5:17,643,972-17,644,234 | + | - | - | - | - | - | Detail |
| CX5g040123 | 5:17,646,818-17,648,003 | + | C1H5g22553 | C2H5g02568 | LOC_Os05g35260 | Os05g0427100 | - | Detail |