| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16374 | 3:31,847,402-31,850,208 | - | C1H3g13504 | CX3g025247 | LOC_Os03g61600 | Os03g0831500 | - | Detail |
| C2H3g08612 | 3:31,854,191-31,859,281 | + | C1H3g30710 | CX3g028872 | LOC_Os03g61620 | Os03g0831700 | - | Detail |
| C2H3g04007 | 3:31,863,077-31,865,775 | + | C1H3g03342 | CX3g029624 | LOC_Os03g61640 | Os03g0831900 | - | Detail |
| C2H3g28205 | 3:31,868,029-31,871,700 | - | C1H3g08775 | CX3g030396 | LOC_Os03g61670 | Os03g0832200 | - | Detail |
| C2H3g20887 | 3:31,872,792-31,874,840 | - | C1H3g25935 | CX3g026430 | LOC_Os03g61680 | Os03g0832300 | OsHYPK | Detail |
| C2H3g17533 | 3:31,878,344-31,881,512 | + | C1H3g22485 | CX3g027599 | LOC_Os03g61690 | Os03g0832400 | - | Detail |
| C2H3g11405 | 3:31,882,409-31,888,368 | + | C1H3g22237 | CX3g027296 | LOC_Os03g61700 | Os03g0832500 | - | Detail |
| C2H3g29424 | 3:31,890,660-31,896,233 | + | C1H3g29450 | CX3g030961 | LOC_Os03g61710 | Os03g0832600 | - | Detail |
| C2H3g26714 | 3:31,901,236-31,907,075 | + | C1H3g27675 | CX3g025285 | LOC_Os03g61720 | Os03g0832800 | - | Detail |
| C2H3g23309 | 3:31,907,045-31,913,071 | - | C1H3g02566 | CX3g026066 | LOC_Os03g61730 | Os03g0832900 | - | Detail |
| C2H3g29006 | 3:31,918,220-31,919,182 | + | C1H3g17390 | CX3g030723 | LOC_Os03g61740 | Os03g0833100 | - | Detail |
| C2H3g14240 | 3:31,919,947-31,922,850 | + | C1H3g15949 | CX3g025091 | LOC_Os03g61750 | Os03g0833200 | OsTRM13, OsTrm13 | Detail |
| C2H3g08860 | 3:31,923,476-31,930,895 | - | C1H3g17700 | CX3g030882 | LOC_Os03g61760 | Os03g0833300 | - | Detail |
| C2H3g22487 | 3:31,941,732-31,944,045 | + | C1H3g21260 | CX3g027103 | LOC_Os03g61780 | Os03g0833600 | - | Detail |
| C2H3g12767 | 3:31,945,202-31,947,834 | - | C1H3g24854 | CX3g026261 | LOC_Os03g61790 | Os03g0833700 | - | Detail |
| C2H3g17593 | 3:31,952,880-31,957,284 | + | C1H3g23913 | CX3g027106 | LOC_Os03g61800 | Os03g0833800 | - | Detail |
| C2H3g26209 | 3:31,957,811-31,960,195 | - | C1H3g05954 | CX3g030666 | LOC_Os03g61810 | Os03g0833900 | - | Detail |
| C2H3g03990 | 3:31,962,251-31,967,773 | + | C1H3g10834 | CX3g026929 | - | Os03g0834000 | - | Detail |
| C2H3g15596 | 3:31,969,608-31,970,675 | + | C1H3g31529 | CX3g027959 | LOC_Os03g61829 | Os03g0834050 | OsHAD1 | Detail |
| C2H3g11398 | 3:31,972,387-31,974,351 | - | C1H3g22428 | CX3g029113 | LOC_Os03g61840 | Os03g0295300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040586 | 5:17,339,722-17,341,022 | - | C1H5g20774 | C2H5g29392 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| CX5g039248 | 5:17,343,985-17,348,301 | + | C1H5g21437 | C2H5g16335 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| CX5g039884 | 5:17,349,099-17,349,413 | + | - | - | - | - | - | Detail |
| CX5g039353 | 5:17,355,132-17,357,805 | + | C1H5g23153 | C2H5g10847 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| CX5g037413 | 5:17,365,645-17,366,484 | - | C1H5g19351 | C2H5g17369 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| CX5g038631 | 5:17,372,859-17,373,395 | + | C1H5g05296 | C2H5g22490 | LOC_Os05g27490 | Os07g0631500 | - | Detail |
| CX5g040333 | 5:17,380,266-17,386,068 | + | C1H5g00420 | C2H5g20050 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| CX5g039680 | 5:17,387,411-17,389,588 | + | C1H5g20696 | C2H5g06562 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| CX5g039117 | 5:17,393,001-17,393,252 | + | - | - | - | - | - | Detail |
| CX5g039405 | 5:17,394,127-17,394,303 | - | - | - | - | - | - | Detail |
| CX5g038496 | 5:17,395,200-17,403,579 | + | C1H1g14405 | C2H5g12654 | LOC_Os05g34790 | Os05g0421000 | - | Detail |
| CX5g037173 | 5:17,407,050-17,407,619 | + | C1H5g14092 | C2H5g20791 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| CX5g038029 | 5:17,413,899-17,416,174 | + | C1H5g19992 | C2H5g00178 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| CX5g039797 | 5:17,426,420-17,428,031 | + | C1H5g29371 | C2H5g17032 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| CX5g038325 | 5:17,440,087-17,440,904 | + | C1H7g20360 | C2H7g10129 | LOC_Os05g28120 | - | - | Detail |
| CX5g038815 | 5:17,441,900-17,448,200 | - | C1H5g12253 | C2H5g09186 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| CX5g038799 | 5:17,471,406-17,475,859 | - | C1H5g11306 | C2H5g24092 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| CX5g038432 | 5:17,478,784-17,486,136 | - | C1H5g25911 | C2H5g03824 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| CX5g039497 | 5:17,488,206-17,492,755 | + | C1H5g25030 | C2H5g16658 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| CX5g037692 | 5:17,496,127-17,498,083 | + | C1H5g31746 | C2H5g05490 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |