| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08610 | 1:13,810,471-13,815,866 | + | C1H1g21722 | CX1g007040 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| C2H1g00961 | 1:13,816,389-13,821,011 | - | C1H1g09984 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C2H1g23105 | 1:13,824,371-13,825,390 | + | C1H1g21027 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C2H1g15692 | 1:13,825,474-13,826,315 | + | C1H1g15878 | - | - | - | - | Detail |
| C2H1g16294 | 1:13,829,095-13,829,599 | + | C1H1g28118 | CX1g005028 | - | - | - | Detail |
| C2H1g16460 | 1:13,834,853-13,836,145 | - | C1H1g15388 | CX1g002058 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C2H1g30124 | 1:13,848,128-13,855,233 | - | C1H1g06071 | CX1g000151 | LOC_Os01g27230 | Os01g0369900 | - | Detail |
| C2H1g01507 | 1:13,883,190-13,884,613 | - | C1H1g03681 | CX1g005680 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| C2H1g22665 | 1:13,889,659-13,890,761 | - | C1H1g30782 | CX1g001786 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| C2H1g21352 | 1:13,895,439-13,896,255 | + | C1H1g22563 | CX1g004528 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| C2H1g26657 | 1:13,918,791-13,920,178 | - | C1H1g11191 | CX1g000438 | LOC_Os01g27340 | Os01g0371200 | - | Detail |
| C2H1g23519 | 1:13,944,433-13,946,386 | - | C1H1g11191 | CX1g000438 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| C2H1g16372 | 1:13,954,176-13,956,281 | + | C1H1g01633 | CX1g000761 | LOC_Os01g27380 | Os01g0371400 | - | Detail |
| C2H1g14709 | 1:13,956,947-13,959,760 | + | C1H1g01995 | CX1g000761 | LOC_Os01g27390 | Os01g0371500 | - | Detail |
| C2H1g17472 | 1:13,973,405-13,974,157 | + | C1H1g01504 | CX1g005217 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| C2H1g25553 | 1:13,974,176-13,974,463 | + | C1H1g01504 | CX1g005217 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| C2H1g29817 | 1:13,978,729-13,979,604 | + | C1H1g12705 | CX1g000438 | LOC_Os01g27480 | Os01g0372400 | - | Detail |
| C2H1g22981 | 1:13,987,387-13,991,283 | - | C1H1g03999 | CX1g002992 | LOC_Os01g27520 | Os01g0372700 | - | Detail |
| C2H1g25759 | 1:13,997,755-13,999,810 | - | C1H1g23536 | - | LOC_Os01g27570 | Os01g0373200 | - | Detail |
| C2H1g27806 | 1:14,003,189-14,003,766 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040586 | 5:17,339,722-17,341,022 | - | C1H5g20774 | C2H5g29392 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| CX5g039248 | 5:17,343,985-17,348,301 | + | C1H5g21437 | C2H5g16335 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| CX5g039884 | 5:17,349,099-17,349,413 | + | - | - | - | - | - | Detail |
| CX5g039353 | 5:17,355,132-17,357,805 | + | C1H5g23153 | C2H5g10847 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| CX5g037413 | 5:17,365,645-17,366,484 | - | C1H5g19351 | C2H5g17369 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| CX5g038631 | 5:17,372,859-17,373,395 | + | C1H5g05296 | C2H5g22490 | LOC_Os05g27490 | Os07g0631500 | - | Detail |
| CX5g040333 | 5:17,380,266-17,386,068 | + | C1H5g00420 | C2H5g20050 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| CX5g039680 | 5:17,387,411-17,389,588 | + | C1H5g20696 | C2H5g06562 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| CX5g039117 | 5:17,393,001-17,393,252 | + | - | - | - | - | - | Detail |
| CX5g039405 | 5:17,394,127-17,394,303 | - | - | - | - | - | - | Detail |
| CX5g038496 | 5:17,395,200-17,403,579 | + | C1H1g14405 | C2H5g12654 | LOC_Os05g34790 | Os05g0421000 | - | Detail |
| CX5g037173 | 5:17,407,050-17,407,619 | + | C1H5g14092 | C2H5g20791 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| CX5g038029 | 5:17,413,899-17,416,174 | + | C1H5g19992 | C2H5g00178 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| CX5g039797 | 5:17,426,420-17,428,031 | + | C1H5g29371 | C2H5g17032 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| CX5g038325 | 5:17,440,087-17,440,904 | + | C1H7g20360 | C2H7g10129 | LOC_Os05g28120 | - | - | Detail |
| CX5g038815 | 5:17,441,900-17,448,200 | - | C1H5g12253 | C2H5g09186 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| CX5g038799 | 5:17,471,406-17,475,859 | - | C1H5g11306 | C2H5g24092 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| CX5g038432 | 5:17,478,784-17,486,136 | - | C1H5g25911 | C2H5g03824 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| CX5g039497 | 5:17,488,206-17,492,755 | + | C1H5g25030 | C2H5g16658 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| CX5g037692 | 5:17,496,127-17,498,083 | + | C1H5g31746 | C2H5g05490 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |