| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27049 | 1:10,582,062-10,584,255 | - | C2H1g21130 | CX1g000332 | LOC_Os01g21410 | Os01g0316500 | - | Detail |
| C1H1g05119 | 1:10,586,299-10,592,332 | + | C2H1g00911 | CX1g005300 | LOC_Os01g21420 | Os01g0316600 | OsSR40 | Detail |
| C1H1g21030 | 1:10,599,505-10,600,791 | + | C2H1g00121 | CX1g001744 | LOC_Os01g21440 | Os01g0316800 | - | Detail |
| C1H1g29623 | 1:10,602,901-10,610,646 | + | C2H1g10654 | CX1g001212 | LOC_Os01g21450 | Os01g0316900 | - | Detail |
| C1H1g25248 | 1:10,653,072-10,654,712 | + | C2H1g14129 | - | LOC_Os01g21590 | Os01g0318400 | - | Detail |
| C1H1g15013 | 1:10,663,226-10,667,858 | + | C2H1g18874 | CX1g004299 | LOC_Os01g21610 | Os01g0318700 | - | Detail |
| C1H1g21172 | 1:10,677,765-10,678,324 | + | C2H1g27201 | CX1g002708 | LOC_Os01g21630 | Os01g0319000 | - | Detail |
| C1H1g07894 | 1:10,681,181-10,683,093 | + | C2H1g27201 | CX1g002708 | LOC_Os01g21630 | Os01g0319000 | - | Detail |
| C1H1g27701 | 1:10,720,743-10,721,250 | - | C2H1g29661 | CX1g005000 | LOC_Os01g21740 | Os01g0320400 | - | Detail |
| C1H1g08165 | 1:10,747,470-10,749,131 | + | C2H1g09744 | CX1g003541 | LOC_Os01g21800 | Os01g0307750 | - | Detail |
| C1H1g21917 | 1:10,751,935-10,764,794 | - | C2H1g03466 | CX1g006680 | LOC_Os01g21820 | Os01g0321300 | - | Detail |
| C1H1g03668 | 1:10,766,236-10,766,595 | - | - | - | - | - | - | Detail |
| C1H1g08985 | 1:10,767,284-10,772,215 | - | C2H1g20739 | CX1g000470 | LOC_Os01g21850 | Os01g0321700 | - | Detail |
| C1H1g24259 | 1:10,772,174-10,774,082 | + | C2H1g26200 | - | - | - | - | Detail |
| C1H1g23145 | 1:10,776,052-10,780,230 | + | C2H1g19595 | CX1g003282 | LOC_Os01g21860 | Os01g0321800 | - | Detail |
| C1H1g04368 | 1:10,785,280-10,785,651 | - | C2H1g24736 | CX1g006862 | LOC_Os01g21880 | Os01g0321900 | - | Detail |
| C1H1g01028 | 1:10,801,303-10,808,398 | - | C2H1g20993 | CX1g006339 | LOC_Os01g21940 | Os01g0322800 | - | Detail |
| C1H1g16371 | 1:10,819,855-10,825,146 | + | C2H1g28662 | CX1g004710 | LOC_Os01g21960 | Os01g0323000 | - | Detail |
| C1H1g02221 | 1:10,826,182-10,829,450 | - | C2H1g16516 | CX1g003996 | LOC_Os01g21970 | Os01g0323100 | - | Detail |
| C1H1g08517 | 1:10,851,605-10,858,069 | + | C2H1g08513 | CX1g004803 | LOC_Os01g21990 | Os01g0323300 | OsCAF2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040586 | 5:17,339,722-17,341,022 | - | C1H5g20774 | C2H5g29392 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| CX5g039248 | 5:17,343,985-17,348,301 | + | C1H5g21437 | C2H5g16335 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| CX5g039884 | 5:17,349,099-17,349,413 | + | - | - | - | - | - | Detail |
| CX5g039353 | 5:17,355,132-17,357,805 | + | C1H5g23153 | C2H5g10847 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| CX5g037413 | 5:17,365,645-17,366,484 | - | C1H5g19351 | C2H5g17369 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| CX5g038631 | 5:17,372,859-17,373,395 | + | C1H5g05296 | C2H5g22490 | LOC_Os05g27490 | Os07g0631500 | - | Detail |
| CX5g040333 | 5:17,380,266-17,386,068 | + | C1H5g00420 | C2H5g20050 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| CX5g039680 | 5:17,387,411-17,389,588 | + | C1H5g20696 | C2H5g06562 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| CX5g039117 | 5:17,393,001-17,393,252 | + | - | - | - | - | - | Detail |
| CX5g039405 | 5:17,394,127-17,394,303 | - | - | - | - | - | - | Detail |
| CX5g038496 | 5:17,395,200-17,403,579 | + | C1H1g14405 | C2H5g12654 | LOC_Os05g34790 | Os05g0421000 | - | Detail |
| CX5g037173 | 5:17,407,050-17,407,619 | + | C1H5g14092 | C2H5g20791 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| CX5g038029 | 5:17,413,899-17,416,174 | + | C1H5g19992 | C2H5g00178 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| CX5g039797 | 5:17,426,420-17,428,031 | + | C1H5g29371 | C2H5g17032 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| CX5g038325 | 5:17,440,087-17,440,904 | + | C1H7g20360 | C2H7g10129 | LOC_Os05g28120 | - | - | Detail |
| CX5g038815 | 5:17,441,900-17,448,200 | - | C1H5g12253 | C2H5g09186 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| CX5g038799 | 5:17,471,406-17,475,859 | - | C1H5g11306 | C2H5g24092 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| CX5g038432 | 5:17,478,784-17,486,136 | - | C1H5g25911 | C2H5g03824 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| CX5g039497 | 5:17,488,206-17,492,755 | + | C1H5g25030 | C2H5g16658 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| CX5g037692 | 5:17,496,127-17,498,083 | + | C1H5g31746 | C2H5g05490 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |