| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20698 | 1:26,375,430-26,379,283 | + | C2H1g20058 | CX1g004912 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| C1H1g14378 | 1:26,382,583-26,384,638 | + | C2H1g29914 | CX1g006000 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| C1H1g06125 | 1:26,391,194-26,397,667 | + | C2H1g17094 | CX1g004328 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| C1H1g22520 | 1:26,398,744-26,402,219 | + | C2H1g13046 | CX1g005290 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| C1H1g02976 | 1:26,402,795-26,405,579 | + | C2H1g24377 | - | - | - | - | Detail |
| C1H1g07891 | 1:26,410,755-26,413,232 | - | C2H1g30017 | CX1g001138 | LOC_Os01g51450 | Os01g0711800 | - | Detail |
| C1H1g26536 | 1:26,416,653-26,418,394 | - | C2H1g29049 | CX1g003877 | LOC_Os01g51470 | Os01g0712500 | - | Detail |
| C1H1g14497 | 1:26,429,530-26,433,561 | - | C2H1g17668 | CX1g005977 | LOC_Os01g51520 | Os01g0712500 | - | Detail |
| C1H1g30738 | 1:26,434,418-26,438,145 | - | C2H1g18972 | - | - | - | - | Detail |
| C1H1g28237 | 1:26,445,898-26,446,545 | - | C2H1g29576 | CX1g003877 | LOC_Os01g51490 | Os01g0711900 | - | Detail |
| C1H1g23448 | 1:26,453,260-26,455,774 | + | C2H1g29576 | CX1g004056 | LOC_Os01g51510 | Os01g0711900 | - | Detail |
| C1H1g09610 | 1:26,462,673-26,465,002 | - | C2H1g21215 | CX1g005977 | LOC_Os01g51530 | Os01g0712600 | - | Detail |
| C1H1g29773 | 1:26,484,284-26,485,560 | + | C2H1g16428 | CX1g004438 | LOC_Os01g51550 | Os01g0712800 | - | Detail |
| C1H1g05015 | 1:26,491,447-26,492,832 | + | C2H1g17193 | CX1g004707 | LOC_Os01g51570 | Os01g0713200 | - | Detail |
| C1H1g16737 | 1:26,495,968-26,500,936 | + | C2H1g10923 | CX1g006175 | LOC_Os01g51610 | Os01g0713600 | OsLFL1 | Detail |
| C1H1g22175 | 1:26,504,171-26,507,341 | + | C2H1g14637 | CX1g006183 | LOC_Os01g51620 | Os01g0713800 | - | Detail |
| C1H1g05405 | 1:26,510,815-26,532,359 | - | C2H1g19385 | CX1g003130 | LOC_Os01g51630 | Os01g0713900 | - | Detail |
| C1H1g08011 | 1:26,536,931-26,541,173 | - | C2H1g30054 | CX1g004684 | LOC_Os01g51640 | Os01g0714100 | - | Detail |
| C1H1g17120 | 1:26,553,664-26,555,085 | - | C2H1g26622 | CX1g003615 | LOC_Os01g51690 | Os01g0714800 | OsWRKY26 | Detail |
| C1H1g10774 | 1:26,563,309-26,566,896 | - | C2H1g20321 | CX1g003805 | LOC_Os01g51700 | Os01g0714900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040586 | 5:17,339,722-17,341,022 | - | C1H5g20774 | C2H5g29392 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| CX5g039248 | 5:17,343,985-17,348,301 | + | C1H5g21437 | C2H5g16335 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| CX5g039884 | 5:17,349,099-17,349,413 | + | - | - | - | - | - | Detail |
| CX5g039353 | 5:17,355,132-17,357,805 | + | C1H5g23153 | C2H5g10847 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| CX5g037413 | 5:17,365,645-17,366,484 | - | C1H5g19351 | C2H5g17369 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| CX5g038631 | 5:17,372,859-17,373,395 | + | C1H5g05296 | C2H5g22490 | LOC_Os05g27490 | Os07g0631500 | - | Detail |
| CX5g040333 | 5:17,380,266-17,386,068 | + | C1H5g00420 | C2H5g20050 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| CX5g039680 | 5:17,387,411-17,389,588 | + | C1H5g20696 | C2H5g06562 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| CX5g039117 | 5:17,393,001-17,393,252 | + | - | - | - | - | - | Detail |
| CX5g039405 | 5:17,394,127-17,394,303 | - | - | - | - | - | - | Detail |
| CX5g038496 | 5:17,395,200-17,403,579 | + | C1H1g14405 | C2H5g12654 | LOC_Os05g34790 | Os05g0421000 | - | Detail |
| CX5g037173 | 5:17,407,050-17,407,619 | + | C1H5g14092 | C2H5g20791 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| CX5g038029 | 5:17,413,899-17,416,174 | + | C1H5g19992 | C2H5g00178 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| CX5g039797 | 5:17,426,420-17,428,031 | + | C1H5g29371 | C2H5g17032 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| CX5g038325 | 5:17,440,087-17,440,904 | + | C1H7g20360 | C2H7g10129 | LOC_Os05g28120 | - | - | Detail |
| CX5g038815 | 5:17,441,900-17,448,200 | - | C1H5g12253 | C2H5g09186 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| CX5g038799 | 5:17,471,406-17,475,859 | - | C1H5g11306 | C2H5g24092 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| CX5g038432 | 5:17,478,784-17,486,136 | - | C1H5g25911 | C2H5g03824 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| CX5g039497 | 5:17,488,206-17,492,755 | + | C1H5g25030 | C2H5g16658 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| CX5g037692 | 5:17,496,127-17,498,083 | + | C1H5g31746 | C2H5g05490 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |