| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g14207 | 3:133,794-134,079 | - | - | CX3g030057 | - | Os03g0102000 | - | Detail |
| C2H3g00981 | 3:133,870-138,264 | + | C1H3g25020 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C2H3g16038 | 3:142,600-153,389 | + | C1H3g05989 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C2H3g07325 | 3:155,037-159,615 | + | C1H3g05608 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C2H3g23495 | 3:159,429-164,729 | - | C1H3g25301 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C2H3g09146 | 3:168,302-169,141 | - | C1H3g20737 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C2H3g19463 | 3:174,039-175,541 | + | C1H3g18000 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C2H3g08091 | 3:184,712-188,564 | + | C1H3g03491 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C2H3g23946 | 3:189,670-191,920 | + | - | - | - | - | - | Detail |
| C2H3g24645 | 3:196,980-197,405 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C2H3g00230 | 3:199,926-200,357 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103200 | - | Detail |
| C2H3g27129 | 3:208,983-209,564 | + | C1H3g18184 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| C2H3g00666 | 3:218,224-219,759 | + | C1H3g24558 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C2H3g07381 | 3:229,277-231,060 | + | C1H3g28077 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C2H3g12984 | 3:233,719-235,979 | - | C1H3g23454 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C2H3g00326 | 3:237,525-241,430 | - | C1H3g02722 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C2H3g00355 | 3:244,970-247,830 | - | C1H3g03839 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C2H3g00823 | 3:249,623-254,908 | - | C1H3g18280 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C2H3g10053 | 3:258,131-262,210 | - | C1H3g03593 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C2H3g14376 | 3:262,800-267,287 | - | C1H3g13137 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040810 | 5:17,165,959-17,169,802 | + | C1H5g18533 | C2H5g04891 | LOC_Os05g34330 | Os05g0415900 | - | Detail |
| CX5g039838 | 5:17,195,679-17,197,664 | - | C1H5g01316 | C2H5g12818 | LOC_Os05g34450 | Os05g0417000 | - | Detail |
| CX5g037706 | 5:17,201,341-17,201,736 | - | - | - | LOC_Os05g34140 | - | - | Detail |
| CX5g038947 | 5:17,212,583-17,217,753 | + | C1H5g11798 | C2H5g07004 | LOC_Os05g34460 | Os05g0417100 | OsDeg10, OsDegP7, TCM5 | Detail |
| CX5g039768 | 5:17,218,832-17,220,259 | + | C1H5g00545 | C2H5g04759 | LOC_Os05g34470 | Os05g0417200 | - | Detail |
| CX5g039015 | 5:17,223,597-17,223,749 | + | C1H4g29914 | C2H4g28812 | - | - | - | Detail |
| CX5g036958 | 5:17,224,438-17,227,201 | + | C1H5g02957 | C2H5g08539 | LOC_Os05g34480 | Os05g0417300 | - | Detail |
| CX5g039968 | 5:17,233,642-17,233,992 | + | C1H5g23511 | C2H5g04823 | LOC_Os05g34500 | Os05g0417600 | - | Detail |
| CX5g037235 | 5:17,235,489-17,235,806 | + | C1H5g30645 | C2H5g22148 | LOC_Os05g34510 | Os05g0417700 | - | Detail |
| CX5g037225 | 5:17,241,529-17,241,840 | - | C1H5g05293 | C2H5g07813 | LOC_Os05g34530 | Os05g0417900 | - | Detail |
| CX5g039245 | 5:17,248,920-17,253,565 | + | C1H5g17144 | C2H5g11479 | LOC_Os05g34540 | Os05g0418000 | OsGDI1 | Detail |
| CX5g037350 | 5:17,256,499-17,261,370 | - | C1H5g20306 | C2H5g09394 | LOC_Os05g34550 | Os05g0418100 | - | Detail |
| CX5g038596 | 5:17,270,219-17,272,037 | - | C1H5g09296 | C2H5g30520 | LOC_Os05g34570 | Os05g0418500 | - | Detail |
| CX5g041058 | 5:17,278,093-17,278,257 | - | - | - | - | - | - | Detail |
| CX5g037191 | 5:17,279,678-17,282,007 | - | C1H5g19185 | C2H5g00424 | LOC_Os05g34600 | Os05g0418800 | - | Detail |
| CX5g037281 | 5:17,292,516-17,295,827 | - | C1H5g01087 | C2H5g04546 | LOC_Os05g34630 | Os05g0419000 | - | Detail |
| CX5g038692 | 5:17,298,728-17,302,877 | + | C1H5g10579 | C2H5g19079 | LOC_Os05g34640 | Os05g0419100 | OsAL5 | Detail |
| CX5g040441 | 5:17,304,911-17,309,064 | - | C1H5g24431 | C2H5g20412 | LOC_Os05g34650 | Os05g0419200 | - | Detail |
| CX5g038818 | 5:17,326,502-17,330,289 | - | C1H5g12812 | C2H5g19507 | LOC_Os05g34670 | Os05g0419500 | - | Detail |
| CX5g038250 | 5:17,335,974-17,336,162 | + | - | - | - | - | - | Detail |