| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15807 | 2:5,046,468-5,051,199 | + | C1H2g10529 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C2H2g25569 | 2:5,052,010-5,058,918 | - | C1H2g05539 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C2H2g18783 | 2:5,072,117-5,073,751 | - | C1H2g08158 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C2H2g11987 | 2:5,088,073-5,089,026 | - | C1H2g24423 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C2H2g02789 | 2:5,093,736-5,096,612 | + | C1H2g30492 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C2H2g20503 | 2:5,097,184-5,098,473 | - | C1H2g18635 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C2H2g05452 | 2:5,104,599-5,110,437 | - | C1H2g14720 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C2H2g30668 | 2:5,113,316-5,118,771 | - | C1H2g22079 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C2H2g20119 | 2:5,123,316-5,128,196 | + | C1H2g00290 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C2H2g08800 | 2:5,130,998-5,133,053 | - | C1H2g01509 | CX2g020248 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C2H2g20788 | 2:5,137,722-5,141,639 | + | C1H2g22046 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C2H2g24738 | 2:5,142,524-5,145,851 | - | C1H2g10608 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C2H2g10447 | 2:5,155,962-5,157,179 | - | C1H2g13038 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C2H2g27059 | 2:5,157,812-5,161,199 | - | C1H2g25618 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| C2H2g02539 | 2:5,185,476-5,186,006 | - | C1H2g23514 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C2H2g22913 | 2:5,201,611-5,204,821 | - | C1H2g23712 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C2H2g21450 | 2:5,220,163-5,220,890 | + | C1H2g24067 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C2H2g30620 | 2:5,225,622-5,228,362 | - | C1H2g20496 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C2H2g13782 | 2:5,235,698-5,238,079 | + | C1H2g04540 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C2H2g29179 | 2:5,239,700-5,268,576 | - | C1H2g00291 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038802 | 5:16,800,828-16,808,564 | + | C1H5g18086 | C2H5g11444 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| CX5g040901 | 5:16,811,186-16,813,935 | - | C1H5g22231 | C2H5g22366 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| CX5g037586 | 5:16,817,187-16,817,345 | + | - | - | - | - | - | Detail |
| CX5g041111 | 5:16,822,164-16,824,139 | - | - | - | - | - | - | Detail |
| CX5g037819 | 5:16,830,530-16,831,408 | - | C1H5g07753 | C2H5g14510 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| CX5g037932 | 5:16,833,965-16,834,515 | - | C1H5g01736 | C2H5g20401 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| CX5g039038 | 5:16,835,165-16,840,740 | - | C1H5g28806 | C2H5g21665 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| CX5g040687 | 5:16,848,670-16,852,861 | - | C1H5g13458 | C2H5g22578 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| CX5g036877 | 5:16,856,501-16,857,487 | + | C1H5g23907 | C2H5g22810 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| CX5g038152 | 5:16,864,787-16,866,030 | + | C1H5g25708 | C2H5g14027 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| CX5g038053 | 5:16,867,421-16,870,790 | + | C1H5g10361 | C2H5g06598 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| CX5g040809 | 5:16,872,672-16,877,520 | + | C1H5g20921 | C2H5g24418 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| CX5g041144 | 5:16,881,705-16,883,663 | - | C1H5g09074 | C2H5g11844 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| CX5g036697 | 5:16,894,309-16,894,494 | - | - | - | - | - | - | Detail |
| CX5g038765 | 5:16,909,840-16,910,740 | - | - | - | - | - | - | Detail |
| CX5g037035 | 5:16,910,815-16,912,020 | + | C1H5g30333 | C2H5g23232 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| CX5g037287 | 5:16,922,109-16,923,161 | + | C1H5g08005 | C2H5g30472 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| CX5g040712 | 5:16,932,191-16,936,870 | - | C1H5g00588 | C2H5g17136 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| CX5g037111 | 5:16,949,814-16,951,708 | + | C1H5g18824 | C2H5g01676 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| CX5g036792 | 5:16,952,093-16,955,941 | - | C1H5g09032 | C2H5g07639 | LOC_Os05g34010 | Os05g0410900 | - | Detail |