| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g02339 | 2:6,255,284-6,260,348 | - | C2H2g08176 | CX2g024197 | LOC_Os02g12730 | Os02g0219200 | - | Detail |
| C1H2g22063 | 2:6,268,058-6,272,187 | - | C2H2g25287 | CX2g024846 | LOC_Os02g12740 | Os02g0219400 | OsGPI8 | Detail |
| C1H2g00777 | 2:6,273,365-6,276,331 | + | C2H2g26355 | CX2g024479 | LOC_Os02g12750 | Os02g0219800 | OsTET2 | Detail |
| C1H2g30667 | 2:6,276,874-6,279,285 | - | C2H2g23365 | CX2g021650 | LOC_Os02g12760 | Os02g0219900 | - | Detail |
| C1H2g24521 | 2:6,287,517-6,289,321 | + | C2H2g09377 | CX2g022104 | LOC_Os02g12780 | Os02g0220000 | OsCKX6 | Detail |
| C1H2g15795 | 2:6,302,079-6,304,178 | + | C2H2g12835 | CX2g022995 | LOC_Os02g12780 | Os02g0220100 | OsCKX7 | Detail |
| C1H2g30241 | 2:6,316,239-6,318,106 | - | C2H2g28607 | CX2g024290 | LOC_Os02g12790 | Os02g0220400 | CGA1, Cga1, OsCga1, OsCGA1, OsGATA11, GATA11 | Detail |
| C1H2g23503 | 2:6,327,275-6,330,726 | + | C2H2g14333 | CX2g019563 | LOC_Os02g12794 | Os02g0220500 | - | Detail |
| C1H2g00344 | 2:6,333,112-6,337,121 | + | C2H2g18250 | CX2g019782 | LOC_Os02g12794 | Os02g0220600 | - | Detail |
| C1H2g04441 | 2:6,338,080-6,344,404 | - | C2H2g03696 | CX2g024312 | LOC_Os02g12810 | Os02g0220700 | - | Detail |
| C1H2g21438 | 2:6,354,064-6,358,481 | - | C2H2g00523 | CX2g024912 | LOC_Os02g12820 | Os02g0221100 | - | Detail |
| C1H2g15495 | 2:6,376,858-6,380,164 | - | C2H2g12344 | - | - | - | - | Detail |
| C1H2g12870 | 2:6,384,526-6,389,058 | + | C2H2g11540 | CX2g022115 | LOC_Os02g12840 | Os02g0221300 | - | Detail |
| C1H2g13065 | 2:6,399,678-6,402,831 | - | C2H2g13827 | CX2g023110 | LOC_Os02g12850 | Os02g0221500 | - | Detail |
| C1H2g20786 | 2:6,405,739-6,409,891 | + | C2H2g10410 | CX2g021581 | - | Os02g0221600 | - | Detail |
| C1H2g10087 | 2:6,412,396-6,416,251 | + | C2H2g06088 | CX2g021336 | LOC_Os02g12880 | Os02g0221800 | - | Detail |
| C1H2g03914 | 2:6,416,377-6,418,853 | - | C2H2g18416 | CX2g021518 | LOC_Os02g12890 | Os02g0221900 | - | Detail |
| C1H2g18447 | 2:6,424,161-6,427,646 | + | C2H2g22233 | CX2g020786 | LOC_Os02g12900 | Os02g0222100 | - | Detail |
| C1H2g12833 | 2:6,428,833-6,431,904 | + | C2H2g17422 | CX2g020146 | LOC_Os02g12910 | Os02g0222200 | - | Detail |
| C1H2g03239 | 2:6,439,736-6,440,110 | - | C2H6g27200 | CX2g024169 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038802 | 5:16,800,828-16,808,564 | + | C1H5g18086 | C2H5g11444 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| CX5g040901 | 5:16,811,186-16,813,935 | - | C1H5g22231 | C2H5g22366 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| CX5g037586 | 5:16,817,187-16,817,345 | + | - | - | - | - | - | Detail |
| CX5g041111 | 5:16,822,164-16,824,139 | - | - | - | - | - | - | Detail |
| CX5g037819 | 5:16,830,530-16,831,408 | - | C1H5g07753 | C2H5g14510 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| CX5g037932 | 5:16,833,965-16,834,515 | - | C1H5g01736 | C2H5g20401 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| CX5g039038 | 5:16,835,165-16,840,740 | - | C1H5g28806 | C2H5g21665 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| CX5g040687 | 5:16,848,670-16,852,861 | - | C1H5g13458 | C2H5g22578 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| CX5g036877 | 5:16,856,501-16,857,487 | + | C1H5g23907 | C2H5g22810 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| CX5g038152 | 5:16,864,787-16,866,030 | + | C1H5g25708 | C2H5g14027 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| CX5g038053 | 5:16,867,421-16,870,790 | + | C1H5g10361 | C2H5g06598 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| CX5g040809 | 5:16,872,672-16,877,520 | + | C1H5g20921 | C2H5g24418 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| CX5g041144 | 5:16,881,705-16,883,663 | - | C1H5g09074 | C2H5g11844 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| CX5g036697 | 5:16,894,309-16,894,494 | - | - | - | - | - | - | Detail |
| CX5g038765 | 5:16,909,840-16,910,740 | - | - | - | - | - | - | Detail |
| CX5g037035 | 5:16,910,815-16,912,020 | + | C1H5g30333 | C2H5g23232 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| CX5g037287 | 5:16,922,109-16,923,161 | + | C1H5g08005 | C2H5g30472 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| CX5g040712 | 5:16,932,191-16,936,870 | - | C1H5g00588 | C2H5g17136 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| CX5g037111 | 5:16,949,814-16,951,708 | + | C1H5g18824 | C2H5g01676 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| CX5g036792 | 5:16,952,093-16,955,941 | - | C1H5g09032 | C2H5g07639 | LOC_Os05g34010 | Os05g0410900 | - | Detail |