| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21556 | 9:17,127,349-17,133,457 | - | C2H9g08359 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C1H9g19093 | 9:17,139,670-17,140,260 | + | - | CX9g056474 | LOC_Os09g35780 | Os09g0526500 | - | Detail |
| C1H9g12923 | 9:17,146,380-17,146,933 | - | C2H9g23914 | - | - | - | - | Detail |
| C1H9g05187 | 9:17,148,932-17,150,504 | - | C2H9g25457 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C1H9g15216 | 9:17,155,623-17,157,739 | - | C2H9g28414 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C1H9g04329 | 9:17,161,222-17,163,941 | - | C2H9g05438 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| C1H9g13766 | 9:17,173,966-17,175,193 | + | C2H9g26745 | CX9g055265 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C1H9g12148 | 9:17,182,248-17,183,559 | + | C2H9g10324 | - | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g01116 | 9:17,183,602-17,186,780 | + | C2H9g10324 | CX9g055830 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g07362 | 9:17,190,988-17,192,576 | + | C2H9g01691 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C1H9g25049 | 9:17,195,929-17,196,462 | - | C2H9g08969 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C1H9g07553 | 9:17,200,149-17,203,100 | - | C2H9g07509 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C1H9g01949 | 9:17,208,904-17,212,955 | + | C2H9g28114 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g14577 | 9:17,213,730-17,213,993 | + | - | CX9g056632 | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| C1H9g05805 | 9:17,224,444-17,225,287 | + | C2H9g04300 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C1H9g07637 | 9:17,228,909-17,231,126 | - | C2H9g16123 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C1H9g29475 | 9:17,242,233-17,244,144 | + | C2H9g26896 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C1H9g30526 | 9:17,270,916-17,275,957 | - | C2H9g28773 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C1H9g28769 | 9:17,279,664-17,282,648 | - | C2H9g02120 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C1H9g03629 | 9:17,285,519-17,293,203 | - | C2H9g25877 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038802 | 5:16,800,828-16,808,564 | + | C1H5g18086 | C2H5g11444 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| CX5g040901 | 5:16,811,186-16,813,935 | - | C1H5g22231 | C2H5g22366 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| CX5g037586 | 5:16,817,187-16,817,345 | + | - | - | - | - | - | Detail |
| CX5g041111 | 5:16,822,164-16,824,139 | - | - | - | - | - | - | Detail |
| CX5g037819 | 5:16,830,530-16,831,408 | - | C1H5g07753 | C2H5g14510 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| CX5g037932 | 5:16,833,965-16,834,515 | - | C1H5g01736 | C2H5g20401 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| CX5g039038 | 5:16,835,165-16,840,740 | - | C1H5g28806 | C2H5g21665 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| CX5g040687 | 5:16,848,670-16,852,861 | - | C1H5g13458 | C2H5g22578 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| CX5g036877 | 5:16,856,501-16,857,487 | + | C1H5g23907 | C2H5g22810 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| CX5g038152 | 5:16,864,787-16,866,030 | + | C1H5g25708 | C2H5g14027 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| CX5g038053 | 5:16,867,421-16,870,790 | + | C1H5g10361 | C2H5g06598 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| CX5g040809 | 5:16,872,672-16,877,520 | + | C1H5g20921 | C2H5g24418 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| CX5g041144 | 5:16,881,705-16,883,663 | - | C1H5g09074 | C2H5g11844 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| CX5g036697 | 5:16,894,309-16,894,494 | - | - | - | - | - | - | Detail |
| CX5g038765 | 5:16,909,840-16,910,740 | - | - | - | - | - | - | Detail |
| CX5g037035 | 5:16,910,815-16,912,020 | + | C1H5g30333 | C2H5g23232 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| CX5g037287 | 5:16,922,109-16,923,161 | + | C1H5g08005 | C2H5g30472 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| CX5g040712 | 5:16,932,191-16,936,870 | - | C1H5g00588 | C2H5g17136 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| CX5g037111 | 5:16,949,814-16,951,708 | + | C1H5g18824 | C2H5g01676 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| CX5g036792 | 5:16,952,093-16,955,941 | - | C1H5g09032 | C2H5g07639 | LOC_Os05g34010 | Os05g0410900 | - | Detail |