| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08691 | 3:3,095,114-3,096,195 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07010 | Os03g0735900 | OsRAM2 | Detail |
| C2H3g15876 | 3:3,097,825-3,098,514 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07060 | Os03g0166600 | - | Detail |
| C2H3g12538 | 3:3,105,582-3,111,263 | + | C1H3g04033 | CX3g030094 | LOC_Os03g07080 | Os03g0166800 | - | Detail |
| C2H3g19555 | 3:3,113,798-3,115,328 | + | C1H3g18965 | CX3g030196 | LOC_Os03g07100 | Os03g0167000 | - | Detail |
| C2H3g13511 | 3:3,116,565-3,117,357 | + | C1H3g18624 | CX10g008216 | LOC_Os10g27174 | Os10g0411700 | - | Detail |
| C2H3g27991 | 3:3,117,507-3,121,829 | - | C1H3g05997 | CX3g025455 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| C2H3g02351 | 3:3,124,852-3,128,753 | + | C1H3g25407 | CX3g027989 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| C2H3g10661 | 3:3,133,286-3,138,036 | + | C1H3g07433 | CX3g026239 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| C2H3g14503 | 3:3,140,502-3,142,873 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g28808 | 3:3,143,155-3,143,415 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g20508 | 3:3,143,733-3,148,329 | - | C1H3g18783 | CX3g030776 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| C2H3g28397 | 3:3,150,226-3,155,148 | + | C1H3g01595 | CX3g026055 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| C2H3g21676 | 3:3,160,484-3,163,307 | + | C1H3g17186 | CX3g029636 | LOC_Os03g07170 | Os03g0168000 | - | Detail |
| C2H3g13648 | 3:3,163,879-3,165,258 | - | C1H3g09927 | CX3g029073 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| C2H3g15532 | 3:3,166,957-3,168,740 | + | C1H3g29196 | CX3g027260 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| C2H3g27665 | 3:3,169,208-3,171,489 | - | C1H3g00563 | CX3g028572 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| C2H3g04176 | 3:3,176,410-3,180,324 | + | C1H3g28864 | CX3g029392 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| C2H3g16262 | 3:3,181,126-3,182,817 | - | C1H3g15091 | CX3g030074 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| C2H3g22195 | 3:3,186,278-3,187,912 | - | C1H3g30181 | CX3g027344 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| C2H3g27571 | 3:3,188,361-3,190,292 | - | C1H3g19869 | CX3g025173 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038498 | 5:16,585,038-16,586,237 | - | C1H5g10471 | C2H5g25089 | LOC_Os05g33460 | Os05g0403600 | - | Detail |
| CX5g037898 | 5:16,590,684-16,592,210 | + | C1H5g09546 | - | LOC_Os05g33500 | Os05g0404000 | - | Detail |
| CX5g039018 | 5:16,593,877-16,596,547 | + | C1H5g02391 | C2H5g04560 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| CX5g038578 | 5:16,598,539-16,601,679 | - | C1H5g29503 | C2H5g30675 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| CX5g040776 | 5:16,602,471-16,602,632 | - | - | - | - | - | - | Detail |
| CX5g040559 | 5:16,610,399-16,616,081 | - | C1H5g16117 | C2H5g08228 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| CX5g038938 | 5:16,620,113-16,628,122 | - | C1H5g10019 | C2H5g25265 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| CX5g040594 | 5:16,646,334-16,648,629 | - | C1H5g17267 | C2H5g01434 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| CX5g038106 | 5:16,650,717-16,653,273 | - | C1H5g26959 | C2H5g22494 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| CX5g040922 | 5:16,663,595-16,668,952 | + | C1H5g04085 | C2H5g11829 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| CX5g041090 | 5:16,671,165-16,674,261 | + | C1H5g22041 | C2H5g25939 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| CX5g040421 | 5:16,675,025-16,680,491 | - | C1H5g10446 | C2H5g22907 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| CX5g040140 | 5:16,694,478-16,705,896 | - | C1H5g00299 | C2H5g21437 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| CX5g038174 | 5:16,709,017-16,709,377 | - | - | - | - | - | - | Detail |
| CX5g038444 | 5:16,721,091-16,722,275 | + | C1H5g09689 | C2H5g07531 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| CX5g039242 | 5:16,723,564-16,725,982 | - | - | C2H5g01393 | - | - | - | Detail |
| CX5g039305 | 5:16,728,375-16,734,987 | - | C1H5g06235 | C2H5g09572 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| CX5g040161 | 5:16,749,952-16,751,636 | + | C1H5g07655 | C2H5g14010 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| CX5g040515 | 5:16,773,179-16,774,675 | - | C1H5g16377 | C2H5g30500 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| CX5g038391 | 5:16,774,807-16,777,106 | + | C1H5g12097 | C2H5g00389 | - | - | - | Detail |