| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16199 | 3:8,341,674-8,344,532 | + | C2H3g17017 | CX3g030195 | LOC_Os03g17030 | Os03g0278500 | - | Detail |
| C1H3g31491 | 3:8,357,161-8,365,901 | + | C2H3g02257 | CX3g025742 | LOC_Os03g17050 | Os03g0278700 | - | Detail |
| C1H3g01943 | 3:8,366,949-8,368,202 | - | C2H3g24586 | CX3g027653 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C1H3g21484 | 3:8,369,148-8,369,780 | - | C2H3g27921 | CX3g028557 | LOC_Os03g17070 | Os03g0278900 | - | Detail |
| C1H3g21261 | 3:8,370,220-8,373,510 | + | C2H3g12181 | CX3g025758 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C1H3g00735 | 3:8,375,657-8,376,243 | - | C2H3g30418 | CX3g029719 | LOC_Os03g17100 | Os03g0279200 | - | Detail |
| C1H3g01283 | 3:8,383,424-8,387,617 | - | C2H3g16393 | CX3g031018 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| C1H3g17646 | 3:8,390,064-8,396,765 | - | C2H3g23941 | CX3g028159 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| C1H3g15850 | 3:8,400,796-8,401,284 | - | C2H3g05642 | CX3g030469 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| C1H3g07795 | 3:8,413,338-8,414,465 | - | - | - | - | - | - | Detail |
| C1H3g07955 | 3:8,417,490-8,418,065 | - | C2H3g05642 | CX3g030469 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| C1H3g15555 | 3:8,429,441-8,430,100 | + | C2H3g27940 | - | - | - | - | Detail |
| C1H3g10805 | 3:8,431,138-8,437,522 | + | C2H3g08725 | CX3g028650 | LOC_Os03g17164 | Os03g0279816 | - | Detail |
| C1H3g09044 | 3:8,441,135-8,442,775 | + | C2H3g11175 | - | LOC_Os03g17170 | Os03g0279900 | - | Detail |
| C1H3g24073 | 3:8,443,404-8,445,164 | + | C2H3g19320 | - | LOC_Os03g17174 | Os03g0279950 | - | Detail |
| C1H3g05773 | 3:8,445,474-8,454,429 | - | C2H3g05359 | CX3g030780 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| C1H3g27832 | 3:8,463,341-8,464,136 | + | C2H3g01051 | - | LOC_Os03g17200 | Os03g0280400 | - | Detail |
| C1H3g22706 | 3:8,481,535-8,488,032 | + | C2H3g27265 | CX3g028994 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| C1H3g01230 | 3:8,489,776-8,490,735 | + | C2H3g20835 | CX3g029125 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| C1H3g29688 | 3:8,491,236-8,493,768 | - | C2H3g25701 | CX3g025025 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038498 | 5:16,585,038-16,586,237 | - | C1H5g10471 | C2H5g25089 | LOC_Os05g33460 | Os05g0403600 | - | Detail |
| CX5g037898 | 5:16,590,684-16,592,210 | + | C1H5g09546 | - | LOC_Os05g33500 | Os05g0404000 | - | Detail |
| CX5g039018 | 5:16,593,877-16,596,547 | + | C1H5g02391 | C2H5g04560 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| CX5g038578 | 5:16,598,539-16,601,679 | - | C1H5g29503 | C2H5g30675 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| CX5g040776 | 5:16,602,471-16,602,632 | - | - | - | - | - | - | Detail |
| CX5g040559 | 5:16,610,399-16,616,081 | - | C1H5g16117 | C2H5g08228 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| CX5g038938 | 5:16,620,113-16,628,122 | - | C1H5g10019 | C2H5g25265 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| CX5g040594 | 5:16,646,334-16,648,629 | - | C1H5g17267 | C2H5g01434 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| CX5g038106 | 5:16,650,717-16,653,273 | - | C1H5g26959 | C2H5g22494 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| CX5g040922 | 5:16,663,595-16,668,952 | + | C1H5g04085 | C2H5g11829 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| CX5g041090 | 5:16,671,165-16,674,261 | + | C1H5g22041 | C2H5g25939 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| CX5g040421 | 5:16,675,025-16,680,491 | - | C1H5g10446 | C2H5g22907 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| CX5g040140 | 5:16,694,478-16,705,896 | - | C1H5g00299 | C2H5g21437 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| CX5g038174 | 5:16,709,017-16,709,377 | - | - | - | - | - | - | Detail |
| CX5g038444 | 5:16,721,091-16,722,275 | + | C1H5g09689 | C2H5g07531 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| CX5g039242 | 5:16,723,564-16,725,982 | - | - | C2H5g01393 | - | - | - | Detail |
| CX5g039305 | 5:16,728,375-16,734,987 | - | C1H5g06235 | C2H5g09572 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| CX5g040161 | 5:16,749,952-16,751,636 | + | C1H5g07655 | C2H5g14010 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| CX5g040515 | 5:16,773,179-16,774,675 | - | C1H5g16377 | C2H5g30500 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| CX5g038391 | 5:16,774,807-16,777,106 | + | C1H5g12097 | C2H5g00389 | - | - | - | Detail |