| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16254 | 2:28,968,825-28,970,596 | + | C2H2g08856 | CX2g024490 | LOC_Os02g51660 | Os02g0752600 | - | Detail |
| C1H2g00963 | 2:28,999,405-29,002,626 | + | C2H2g08284 | CX2g021449 | LOC_Os02g51680 | Os02g0753000 | - | Detail |
| C1H2g18992 | 2:29,009,796-29,011,888 | + | C2H2g25596 | CX2g018924 | LOC_Os02g51700 | Os02g0753200 | - | Detail |
| C1H2g26243 | 2:29,012,717-29,013,366 | + | C2H2g02815 | CX2g018987 | LOC_Os02g51710 | Os02g0753300 | - | Detail |
| C1H2g30879 | 2:29,021,437-29,024,498 | - | C2H2g30533 | CX2g019204 | LOC_Os02g51730 | Os02g0753500 | - | Detail |
| C1H2g24008 | 2:29,032,633-29,034,925 | - | C2H2g21591 | CX2g020004 | LOC_Os02g51750 | Os02g0753800 | ANN2, OsANN2 | Detail |
| C1H2g30887 | 2:29,043,524-29,046,258 | + | C2H2g30548 | CX2g020182 | LOC_Os02g51760 | Os02g0753900 | - | Detail |
| C1H2g24939 | 2:29,046,871-29,050,201 | + | C2H2g08318 | CX2g020194 | LOC_Os02g51770 | Os02g0754000 | - | Detail |
| C1H2g05832 | 2:29,050,934-29,055,297 | - | C2H2g21614 | CX2g024338 | LOC_Os02g51780 | Os02g0754100 | - | Detail |
| C1H2g15781 | 2:29,057,111-29,058,539 | + | C2H2g19225 | CX2g019527 | LOC_Os02g51790 | Os02g0754300 | - | Detail |
| C1H2g31446 | 2:29,061,881-29,063,865 | - | C2H2g08622 | CX2g021972 | LOC_Os02g51799 | Os02g0754400 | Os2R_MYB31 | Detail |
| C1H2g12325 | 2:29,076,841-29,084,709 | + | C2H2g03959 | CX2g020141 | LOC_Os02g51810 | Os02g0754500 | OM64 | Detail |
| C1H2g07702 | 2:29,085,043-29,086,432 | + | C2H2g24256 | CX2g020843 | LOC_Os02g51820 | Os02g0754600 | - | Detail |
| C1H2g01909 | 2:29,086,632-29,091,708 | - | C2H2g22795 | CX2g020955 | LOC_Os02g51830 | Os02g0754700 | - | Detail |
| C1H2g27515 | 2:29,093,263-29,095,457 | + | C2H2g17343 | CX2g019973 | LOC_Os02g51840 | Os02g0754800 | - | Detail |
| C1H2g28331 | 2:29,096,591-29,099,056 | - | C2H2g07883 | CX2g022594 | LOC_Os02g51850 | Os02g0754900 | - | Detail |
| C1H2g20999 | 2:29,106,198-29,107,776 | - | C2H2g17447 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C1H2g15196 | 2:29,109,364-29,114,747 | - | C2H2g23797 | CX2g022833 | LOC_Os02g51860 | Os02g0755000 | OsTSD2 | Detail |
| C1H2g30118 | 2:29,127,474-29,133,457 | + | C2H2g07992 | CX2g023524 | LOC_Os02g51890 | Os02g0755400 | - | Detail |
| C1H2g05375 | 2:29,134,036-29,135,583 | - | C2H2g18444 | CX2g020690 | LOC_Os02g51900 | Os02g0755500 | UGT85E1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038498 | 5:16,585,038-16,586,237 | - | C1H5g10471 | C2H5g25089 | LOC_Os05g33460 | Os05g0403600 | - | Detail |
| CX5g037898 | 5:16,590,684-16,592,210 | + | C1H5g09546 | - | LOC_Os05g33500 | Os05g0404000 | - | Detail |
| CX5g039018 | 5:16,593,877-16,596,547 | + | C1H5g02391 | C2H5g04560 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| CX5g038578 | 5:16,598,539-16,601,679 | - | C1H5g29503 | C2H5g30675 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| CX5g040776 | 5:16,602,471-16,602,632 | - | - | - | - | - | - | Detail |
| CX5g040559 | 5:16,610,399-16,616,081 | - | C1H5g16117 | C2H5g08228 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| CX5g038938 | 5:16,620,113-16,628,122 | - | C1H5g10019 | C2H5g25265 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| CX5g040594 | 5:16,646,334-16,648,629 | - | C1H5g17267 | C2H5g01434 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| CX5g038106 | 5:16,650,717-16,653,273 | - | C1H5g26959 | C2H5g22494 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| CX5g040922 | 5:16,663,595-16,668,952 | + | C1H5g04085 | C2H5g11829 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| CX5g041090 | 5:16,671,165-16,674,261 | + | C1H5g22041 | C2H5g25939 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| CX5g040421 | 5:16,675,025-16,680,491 | - | C1H5g10446 | C2H5g22907 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| CX5g040140 | 5:16,694,478-16,705,896 | - | C1H5g00299 | C2H5g21437 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| CX5g038174 | 5:16,709,017-16,709,377 | - | - | - | - | - | - | Detail |
| CX5g038444 | 5:16,721,091-16,722,275 | + | C1H5g09689 | C2H5g07531 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| CX5g039242 | 5:16,723,564-16,725,982 | - | - | C2H5g01393 | - | - | - | Detail |
| CX5g039305 | 5:16,728,375-16,734,987 | - | C1H5g06235 | C2H5g09572 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| CX5g040161 | 5:16,749,952-16,751,636 | + | C1H5g07655 | C2H5g14010 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| CX5g040515 | 5:16,773,179-16,774,675 | - | C1H5g16377 | C2H5g30500 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| CX5g038391 | 5:16,774,807-16,777,106 | + | C1H5g12097 | C2H5g00389 | - | - | - | Detail |