| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24474 | 1:2,855,549-2,861,023 | - | C2H1g08155 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C1H1g28973 | 1:2,861,627-2,865,314 | - | C2H1g24105 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C1H1g28709 | 1:2,866,693-2,868,772 | + | C2H1g23761 | CX1g005149 | LOC_Os01g07120 | Os01g0165000 | - | Detail |
| C1H1g06420 | 1:2,869,020-2,870,975 | - | C2H1g13562 | CX1g003505 | LOC_Os01g07130 | Os01g0165100 | - | Detail |
| C1H1g09488 | 1:2,872,413-2,877,974 | - | C2H1g23637 | CX1g005200 | LOC_Os01g07140 | Os01g0165200 | - | Detail |
| C1H1g11655 | 1:2,915,334-2,918,475 | + | C2H1g08507 | CX1g007089 | LOC_Os01g07200 | Os01g0166100 | - | Detail |
| C1H1g25978 | 1:2,919,050-2,921,284 | + | C2H1g01020 | CX1g002009 | LOC_Os01g07212 | Os01g0166300 | - | Detail |
| C1H1g13936 | 1:2,923,443-2,925,123 | + | C2H1g10111 | - | LOC_Os01g07212 | Os01g0166400 | - | Detail |
| C1H1g07427 | 1:2,940,377-2,942,061 | + | C2H1g02905 | CX1g000127 | LOC_Os01g07250 | Os01g0166700 | - | Detail |
| C1H1g26302 | 1:2,942,833-2,946,371 | - | C2H1g25257 | CX1g005999 | LOC_Os01g07260 | Os01g0166800 | - | Detail |
| C1H1g20393 | 1:2,946,811-2,947,032 | + | C2H1g06988 | CX1g001312 | - | Os01g0167100 | - | Detail |
| C1H1g04419 | 1:2,967,967-2,970,079 | + | C2H1g17311 | CX1g006992 | LOC_Os01g06740 | Os01g0167400 | - | Detail |
| C1H1g22310 | 1:2,970,741-2,973,987 | - | C2H1g15989 | CX1g004676 | LOC_Os01g07310 | Os01g0167500 | - | Detail |
| C1H1g19378 | 1:2,978,815-2,979,883 | + | C2H1g11597 | CX1g004086 | LOC_Os01g07320 | Os01g0167600 | - | Detail |
| C1H1g21201 | 1:2,981,177-2,991,422 | - | C2H1g08925 | CX1g005536 | LOC_Os01g07340 | Os01g0167750 | - | Detail |
| C1H1g22514 | 1:2,993,362-2,995,606 | - | C2H1g08657 | CX1g001588 | LOC_Os01g07350 | Os01g0167800 | - | Detail |
| C1H1g16535 | 1:2,997,247-3,000,528 | - | C2H1g00388 | CX1g004828 | LOC_Os01g07360 | Os01g0167900 | - | Detail |
| C1H1g01854 | 1:3,002,950-3,008,871 | - | C2H1g24620 | CX1g001191 | LOC_Os01g07370 | Os01g0168100 | - | Detail |
| C1H1g14782 | 1:3,014,065-3,015,933 | - | C2H1g00503 | CX1g003480 | LOC_Os01g07376 | Os01g0168200 | - | Detail |
| C1H1g01998 | 1:3,017,575-3,020,622 | - | C2H1g03327 | CX1g005935 | LOC_Os01g07382 | Os01g0168300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038498 | 5:16,585,038-16,586,237 | - | C1H5g10471 | C2H5g25089 | LOC_Os05g33460 | Os05g0403600 | - | Detail |
| CX5g037898 | 5:16,590,684-16,592,210 | + | C1H5g09546 | - | LOC_Os05g33500 | Os05g0404000 | - | Detail |
| CX5g039018 | 5:16,593,877-16,596,547 | + | C1H5g02391 | C2H5g04560 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| CX5g038578 | 5:16,598,539-16,601,679 | - | C1H5g29503 | C2H5g30675 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| CX5g040776 | 5:16,602,471-16,602,632 | - | - | - | - | - | - | Detail |
| CX5g040559 | 5:16,610,399-16,616,081 | - | C1H5g16117 | C2H5g08228 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| CX5g038938 | 5:16,620,113-16,628,122 | - | C1H5g10019 | C2H5g25265 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| CX5g040594 | 5:16,646,334-16,648,629 | - | C1H5g17267 | C2H5g01434 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| CX5g038106 | 5:16,650,717-16,653,273 | - | C1H5g26959 | C2H5g22494 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| CX5g040922 | 5:16,663,595-16,668,952 | + | C1H5g04085 | C2H5g11829 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| CX5g041090 | 5:16,671,165-16,674,261 | + | C1H5g22041 | C2H5g25939 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| CX5g040421 | 5:16,675,025-16,680,491 | - | C1H5g10446 | C2H5g22907 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| CX5g040140 | 5:16,694,478-16,705,896 | - | C1H5g00299 | C2H5g21437 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| CX5g038174 | 5:16,709,017-16,709,377 | - | - | - | - | - | - | Detail |
| CX5g038444 | 5:16,721,091-16,722,275 | + | C1H5g09689 | C2H5g07531 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| CX5g039242 | 5:16,723,564-16,725,982 | - | - | C2H5g01393 | - | - | - | Detail |
| CX5g039305 | 5:16,728,375-16,734,987 | - | C1H5g06235 | C2H5g09572 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| CX5g040161 | 5:16,749,952-16,751,636 | + | C1H5g07655 | C2H5g14010 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| CX5g040515 | 5:16,773,179-16,774,675 | - | C1H5g16377 | C2H5g30500 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| CX5g038391 | 5:16,774,807-16,777,106 | + | C1H5g12097 | C2H5g00389 | - | - | - | Detail |