| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23727 | 6:1,154,556-1,156,689 | + | C1H6g21967 | CX6g044602 | LOC_Os06g04080 | Os06g0131500 | - | Detail |
| C2H6g24358 | 6:1,162,866-1,166,381 | - | C1H6g10070 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C2H6g10300 | 6:1,184,169-1,185,533 | - | - | CX6g042310 | LOC_Os06g04130 | Os06g0132100 | - | Detail |
| C2H6g28984 | 6:1,187,456-1,188,025 | - | C1H6g21299 | CX6g043564 | LOC_Os06g04140 | Os06g0132300 | - | Detail |
| C2H6g09752 | 6:1,188,834-1,189,814 | - | C1H6g21299 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C2H6g08599 | 6:1,191,519-1,197,341 | - | C1H6g23000 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C2H6g25055 | 6:1,211,402-1,215,328 | - | C1H6g17422 | CX6g041905 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C2H6g03148 | 6:1,218,691-1,223,612 | + | C1H6g23540 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C2H6g22217 | 6:1,226,616-1,226,912 | + | - | CX6g043924 | LOC_Os06g04210 | Os06g0133200 | - | Detail |
| C2H6g28022 | 6:1,230,375-1,230,659 | + | - | CX6g044984 | LOC_Os06g04220 | Os06g0133300 | - | Detail |
| C2H6g14484 | 6:1,233,911-1,234,174 | + | C1H6g09083 | CX6g042298 | LOC_Os06g04230 | Os06g0133400 | - | Detail |
| C2H6g03555 | 6:1,235,005-1,235,286 | - | C1H6g09083 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C2H6g25685 | 6:1,241,084-1,242,151 | + | - | CX6g042617 | LOC_Os06g04250 | Os06g0133600 | - | Detail |
| C2H6g05959 | 6:1,257,209-1,259,084 | + | C1H6g07345 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C2H6g30353 | 6:1,260,546-1,264,031 | - | C1H6g21882 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C2H6g15004 | 6:1,267,478-1,271,368 | + | C1H6g02027 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C2H6g06475 | 6:1,271,937-1,273,654 | - | C1H6g14754 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C2H6g13486 | 6:1,274,602-1,276,735 | - | C1H6g07407 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C2H6g20989 | 6:1,276,836-1,277,219 | - | C1H6g07407 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C2H6g29611 | 6:1,286,539-1,288,975 | - | C1H6g30767 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038356 | 5:16,245,238-16,247,055 | - | C1H5g29241 | - | LOC_Os05g32960 | Os05g0396900 | - | Detail |
| CX5g040458 | 5:16,252,407-16,252,784 | + | C1H5g21966 | C2H5g21390 | LOC_Os05g31140 | Os05g0375400 | OsEGL1 | Detail |
| CX5g036714 | 5:16,253,015-16,253,197 | - | - | - | - | - | - | Detail |
| CX5g039369 | 5:16,261,945-16,264,028 | + | - | - | - | - | - | Detail |
| CX5g036840 | 5:16,266,146-16,268,564 | - | C1H5g05270 | C2H5g22161 | LOC_Os05g32970 | Os05g0397300 | - | Detail |
| CX5g038178 | 5:16,275,771-16,277,946 | - | C1H5g28580 | C2H5g21572 | LOC_Os05g33000 | Os05g0397650 | - | Detail |
| CX5g039927 | 5:16,279,798-16,286,417 | - | C1H5g17477 | C2H5g14805 | LOC_Os05g33020 | Os05g0397700 | - | Detail |
| CX5g039285 | 5:16,286,709-16,287,107 | + | C1H5g00765 | C2H5g25635 | - | Os05g0397800 | - | Detail |
| CX5g039288 | 5:16,287,351-16,290,797 | + | C1H5g00765 | C2H5g25635 | LOC_Os05g33010 | Os05g0397800 | - | Detail |
| CX5g036879 | 5:16,292,268-16,296,393 | + | C1H5g15753 | C2H5g00092 | LOC_Os05g33030 | Os05g0397900 | - | Detail |
| CX5g037239 | 5:16,297,080-16,297,933 | - | C1H5g11914 | C2H5g20286 | LOC_Os05g33040 | Os05g0398000 | OsCYCP1;1 | Detail |
| CX5g037249 | 5:16,302,336-16,310,801 | - | C1H5g28942 | C2H5g27231 | LOC_Os05g33050 | Os05g0398100 | - | Detail |
| CX5g037475 | 5:16,330,083-16,334,696 | + | C1H5g19211 | C2H5g14955 | LOC_Os05g33080 | Os05g0398800 | - | Detail |
| CX5g037015 | 5:16,335,360-16,335,515 | + | - | - | - | - | - | Detail |
| CX5g036980 | 5:16,356,553-16,361,282 | + | C1H5g31879 | C2H5g23530 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| CX5g041133 | 5:16,386,252-16,387,475 | + | C1H5g21497 | C2H5g28257 | LOC_Os05g33140 | Os05g0399400 | - | Detail |
| CX5g037858 | 5:16,399,846-16,401,252 | + | C1H5g31105 | C2H5g05340 | LOC_Os05g33150 | Os05g0399700 | OsChia1d, Cht7 | Detail |
| CX5g039282 | 5:16,405,734-16,405,892 | + | - | - | - | - | - | Detail |
| CX5g039652 | 5:16,409,456-16,411,705 | + | C1H5g16219 | C2H5g20742 | LOC_Os05g33190 | Os05g0400100 | - | Detail |
| CX5g040002 | 5:16,414,466-16,416,859 | + | C1H5g18465 | C2H5g29371 | LOC_Os05g33200 | Os05g0400200 | - | Detail |