| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25251 | 4:29,770,937-29,774,339 | + | C2H4g18780 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C1H4g10442 | 4:29,775,601-29,777,954 | - | C2H4g23930 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C1H4g01418 | 4:29,779,140-29,782,893 | + | C2H4g04165 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C1H4g14062 | 4:29,791,967-29,793,229 | + | C2H4g12154 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C1H4g07320 | 4:29,800,537-29,804,207 | + | C2H4g24314 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C1H4g11017 | 4:29,804,295-29,807,449 | - | C2H4g10649 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C1H4g09478 | 4:29,808,705-29,811,139 | - | C2H4g23402 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C1H4g00749 | 4:29,811,212-29,814,428 | - | - | - | - | - | - | Detail |
| C1H4g01273 | 4:29,814,498-29,815,073 | - | C2H4g26783 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C1H4g10679 | 4:29,818,442-29,821,945 | + | C2H4g26457 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C1H4g10307 | 4:29,828,271-29,830,881 | - | C2H4g05368 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C1H4g20800 | 4:29,831,258-29,832,769 | - | C2H4g28278 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C1H4g20558 | 4:29,833,528-29,837,062 | - | C2H4g09192 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C1H4g00350 | 4:29,839,243-29,842,416 | - | C2H4g18679 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| C1H4g00962 | 4:29,846,976-29,848,929 | + | C2H4g24032 | CX4g034090 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| C1H4g27883 | 4:29,851,581-29,853,020 | + | C2H4g19769 | CX4g034422 | LOC_Os04g57430 | Os04g0670100 | - | Detail |
| C1H4g27420 | 4:29,853,298-29,856,748 | - | C2H4g02826 | CX4g033521 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| C1H4g13887 | 4:29,861,441-29,864,962 | - | C2H4g28360 | CX4g031684 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| C1H4g28653 | 4:29,865,528-29,867,244 | + | C2H4g01861 | CX4g032812 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| C1H4g15123 | 4:29,868,947-29,870,610 | + | C2H4g11996 | CX4g032203 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040945 | 5:16,018,950-16,025,067 | + | C1H5g15655 | C2H5g04545 | LOC_Os05g32580 | Os05g0392100 | - | Detail |
| CX5g040654 | 5:16,029,340-16,031,104 | + | C1H5g08588 | C2H5g19741 | LOC_Os05g32590 | Os05g0392200 | - | Detail |
| CX5g040645 | 5:16,031,940-16,037,449 | + | C1H5g13943 | C2H5g27504 | LOC_Os05g32600 | Os05g0392300 | - | Detail |
| CX5g038385 | 5:16,040,102-16,040,284 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037808 | 5:16,041,817-16,046,820 | + | C1H5g04324 | C2H5g25979 | LOC_Os05g32610 | Os05g0392400 | OsCHR742, CHR742 | Detail |
| CX5g037970 | 5:16,056,799-16,060,097 | - | C1H5g18105 | C2H5g29305 | LOC_Os05g32630 | Os05g0392700 | - | Detail |
| CX5g040909 | 5:16,071,051-16,075,389 | + | C1H5g12163 | C2H5g30679 | LOC_Os05g32660 | Os05g0393100 | - | Detail |
| CX5g040046 | 5:16,077,082-16,077,744 | + | C1H5g14541 | C2H5g16194 | LOC_Os05g32670 | Os05g0393200 | - | Detail |
| CX5g038745 | 5:16,082,414-16,087,241 | + | C1H5g14141 | C2H5g06211 | LOC_Os05g32680 | Os05g0393400 | - | Detail |
| CX5g038709 | 5:16,110,128-16,115,377 | + | C1H5g03286 | C2H5g04254 | LOC_Os05g32720 | Os05g0393800 | - | Detail |
| CX5g040583 | 5:16,115,946-16,117,226 | - | C1H5g29107 | C2H5g00793 | LOC_Os05g32730 | Os05g0393900 | - | Detail |
| CX5g037722 | 5:16,123,098-16,127,768 | + | C1H5g22904 | C2H5g30102 | LOC_Os05g32760 | Os05g0394200 | - | Detail |
| CX5g039171 | 5:16,164,165-16,171,080 | - | C1H5g13219 | C2H5g26994 | LOC_Os05g32820 | Os05g0395000 | - | Detail |
| CX5g040031 | 5:16,175,647-16,176,048 | + | - | - | - | - | - | Detail |
| CX5g038891 | 5:16,178,255-16,184,894 | + | C1H5g24739 | C2H5g27249 | LOC_Os05g32850 | Os05g0395300 | DPS1, OsCBSDUF1 | Detail |
| CX5g039801 | 5:16,185,757-16,186,059 | + | C1H5g04152 | - | LOC_Os05g32860 | Os05g0395400 | - | Detail |
| CX5g039382 | 5:16,196,553-16,196,987 | + | - | - | - | - | - | Detail |
| CX5g041092 | 5:16,200,873-16,205,301 | - | C1H5g20136 | C2H5g25398 | LOC_Os05g32880 | Os05g0395600 | - | Detail |
| CX5g038914 | 5:16,212,081-16,213,007 | + | - | - | - | - | - | Detail |
| CX5g038378 | 5:16,230,497-16,232,703 | + | - | - | LOC_Os05g32900 | Os05g0396000 | - | Detail |