| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23514 | 6:16,348,198-16,348,907 | - | C1H6g20688 | CX6g045905 | LOC_Os06g32600 | Os06g0509900 | - | Detail |
| C2H6g24462 | 6:16,431,579-16,432,280 | - | C1H6g10133 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g24549 | 6:16,457,623-16,458,351 | - | C1H6g30221 | CX6g041463 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g14991 | 6:16,483,688-16,484,416 | - | C1H6g30221 | CX6g045619 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g23945 | 6:16,509,772-16,510,500 | - | C1H6g30221 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g16104 | 6:16,538,260-16,538,988 | - | C1H6g15287 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g27735 | 6:16,544,055-16,544,504 | - | C1H11g18273 | - | - | - | - | Detail |
| C2H6g13109 | 6:16,552,095-16,552,876 | - | C1H6g28912 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g11325 | 6:16,555,595-16,556,742 | - | C1H6g14560 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g13030 | 6:16,568,032-16,568,670 | - | C1H6g25233 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g03154 | 6:16,602,458-16,603,353 | - | - | - | - | - | - | Detail |
| C2H6g27631 | 6:16,610,374-16,611,018 | - | C1H6g12241 | CX6g045360 | LOC_Os06g32600 | Os06g0517700 | OsTHION15 | Detail |
| C2H6g21791 | 6:16,626,079-16,626,484 | + | C1H6g12479 | CX6g045309 | - | Os06g0518300 | - | Detail |
| C2H6g04594 | 6:16,651,278-16,651,469 | + | C1H6g27321 | - | LOC_Os06g32720 | Os06g0519400 | - | Detail |
| C2H6g10214 | 6:16,651,569-16,654,254 | + | C1H6g27321 | CX6g042017 | LOC_Os06g32720 | Os06g0519400 | - | Detail |
| C2H6g10213 | 6:16,659,675-16,661,257 | + | C1H6g06224 | CX6g042017 | LOC_Os06g32730 | Os06g0520600 | - | Detail |
| C2H6g21865 | 6:16,673,501-16,674,029 | + | - | CX6g042771 | - | - | - | Detail |
| C2H6g19194 | 6:16,681,643-16,691,005 | + | C1H6g09724 | CX6g043106 | LOC_Os06g32780 | Os06g0519700 | - | Detail |
| C2H6g13541 | 6:16,693,260-16,695,415 | + | C1H6g01033 | - | - | - | - | Detail |
| C2H6g07675 | 6:16,702,638-16,707,866 | + | C1H6g06224 | CX6g043682 | LOC_Os06g32860 | Os06g0520600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002259 | 1:22,666,064-22,666,240 | - | - | - | - | Os09g0414600 | - | Detail |
| CX1g005176 | 1:22,667,269-22,668,669 | + | - | - | LOC_Os01g43940 | Os01g0630200 | - | Detail |
| CX1g000988 | 1:22,672,374-22,672,856 | - | - | - | LOC_Os01g43950 | Os01g0630300 | - | Detail |
| CX1g005159 | 1:22,675,088-22,675,345 | - | - | - | - | - | - | Detail |
| CX1g005258 | 1:22,686,355-22,692,747 | + | C1H1g00799 | C2H1g22336 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| CX1g002535 | 1:22,694,102-22,696,768 | + | C1H1g26941 | C2H1g25630 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| CX1g003884 | 1:22,710,116-22,710,523 | - | - | - | - | Os03g0708250 | - | Detail |
| CX1g001624 | 1:22,715,118-22,721,374 | + | C1H1g05926 | C2H1g14517 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| CX1g000338 | 1:22,728,120-22,729,515 | + | C1H1g08811 | C2H1g24347 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| CX1g001009 | 1:22,750,806-22,754,179 | + | C1H1g07009 | C2H1g14152 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| CX1g005012 | 1:22,756,152-22,756,430 | + | - | - | LOC_Os01g44120 | Os01g0631800 | - | Detail |
| CX1g000935 | 1:22,758,917-22,764,310 | + | C1H1g05320 | C2H1g16370 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| CX1g005415 | 1:22,767,425-22,770,367 | - | C1H5g06864 | - | LOC_Os01g44140 | Os01g0632000 | - | Detail |
| CX1g000578 | 1:22,803,824-22,807,846 | + | C1H1g09519 | C2H1g23506 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| CX1g004196 | 1:22,810,334-22,813,306 | + | C1H1g25629 | C2H1g25610 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| CX1g001984 | 1:22,815,148-22,817,588 | + | C1H1g17417 | C2H1g21259 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| CX1g005798 | 1:22,822,682-22,824,302 | + | C1H1g26792 | C2H1g13154 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| CX1g002472 | 1:22,828,351-22,835,274 | - | C1H1g26567 | C2H1g30459 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| CX1g002072 | 1:22,861,487-22,863,474 | - | C1H1g01839 | C2H1g20909 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| CX1g000429 | 1:22,865,008-22,866,572 | - | C1H1g04340 | C2H1g10174 | LOC_Os01g44340 | Os01g0634600 | - | Detail |