| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16281 | 3:23,985,910-23,987,995 | - | C1H3g29144 | CX3g031226 | LOC_Os03g46100 | Os03g0663800 | FLOC1 | Detail |
| C2H3g05304 | 3:23,989,142-23,991,540 | - | C1H3g10937 | CX3g026799 | LOC_Os03g46110 | Os03g0663900 | EPAD1 | Detail |
| C2H3g13262 | 3:23,992,868-23,994,346 | + | C1H3g22844 | CX3g027937 | LOC_Os03g46140 | Os03g0664300 | - | Detail |
| C2H3g25255 | 3:24,000,869-24,001,651 | + | C1H3g05960 | CX3g026593 | LOC_Os03g46180 | Os03g0664600 | - | Detail |
| C2H3g30526 | 3:24,001,282-24,005,186 | - | C1H3g08349 | CX3g028782 | LOC_Os03g46190 | Os03g0664700 | - | Detail |
| C2H3g29200 | 3:24,013,612-24,014,551 | + | C1H3g19227 | CX3g028453 | LOC_Os03g46250 | Os03g0665000 | - | Detail |
| C2H3g13481 | 3:24,016,566-24,019,878 | - | C1H3g03624 | CX3g028439 | LOC_Os03g46260 | Os03g0665200 | OsFLZ11 | Detail |
| C2H3g17717 | 3:24,050,392-24,056,147 | - | C1H3g03137 | CX3g025719 | LOC_Os07g15160 | Os01g0646700 | - | Detail |
| C2H3g02010 | 3:24,058,754-24,061,638 | + | C1H3g02596 | CX3g030454 | LOC_Os03g46310 | Os03g0665800 | - | Detail |
| C2H3g24958 | 3:24,066,283-24,073,307 | + | C1H3g06192 | CX3g030422 | LOC_Os03g46330 | Os03g0666100 | - | Detail |
| C2H3g06923 | 3:24,073,389-24,077,239 | - | C1H3g26270 | CX3g025831 | LOC_Os03g46340 | Os03g0666200 | OsSWAP70A | Detail |
| C2H3g08439 | 3:24,082,106-24,083,234 | + | C1H3g10336 | CX3g029931 | LOC_Os03g46350 | Os03g0666300 | - | Detail |
| C2H3g02623 | 3:24,094,827-24,101,069 | + | C1H3g03788 | CX3g027340 | LOC_Os03g46390 | Os03g0666500 | - | Detail |
| C2H3g22843 | 3:24,101,688-24,104,287 | - | C1H3g03865 | CX3g026425 | LOC_Os03g46410 | Os03g0666700 | - | Detail |
| C2H3g09706 | 3:24,114,313-24,117,941 | - | C1H3g13561 | CX3g026086 | LOC_Os03g46440 | Os03g0667100 | - | Detail |
| C2H3g16749 | 3:24,122,410-24,123,614 | - | C1H3g09851 | CX3g030979 | LOC_Os03g46454 | Os03g0667300 | OsIRT2 | Detail |
| C2H3g11751 | 3:24,131,253-24,136,055 | - | C1H3g21913 | CX3g025528 | LOC_Os03g46470 | Os03g0667500 | OsIRT1 | Detail |
| C2H3g12375 | 3:24,137,797-24,143,096 | - | C1H3g14101 | CX3g026005 | LOC_Os03g46480 | Os03g0667700 | - | Detail |
| C2H3g21545 | 3:24,156,214-24,157,683 | + | C1H3g27711 | CX3g025010 | LOC_Os03g46510 | Os03g0668000 | - | Detail |
| C2H3g00299 | 3:24,163,659-24,165,337 | + | C1H3g30467 | CX3g030801 | LOC_Os03g46530 | Os03g0668000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037221 | 5:15,758,693-15,762,309 | + | C1H5g02248 | C2H5g17569 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| CX5g038265 | 5:15,763,178-15,763,498 | + | - | - | - | - | - | Detail |
| CX5g040484 | 5:15,771,551-15,776,740 | + | C1H5g17467 | C2H5g24466 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| CX5g040873 | 5:15,798,157-15,802,246 | + | C1H5g20766 | C2H5g28293 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| CX5g037113 | 5:15,815,954-15,818,286 | - | C1H5g02261 | C2H5g13580 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| CX5g038872 | 5:15,818,925-15,821,355 | + | C1H5g02591 | C2H5g20984 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| CX5g040346 | 5:15,822,047-15,825,875 | - | C1H5g03931 | C2H5g00884 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| CX5g036712 | 5:15,840,658-15,844,004 | + | C1H5g01584 | C2H5g14052 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| CX5g040013 | 5:15,844,470-15,847,070 | - | C1H5g08791 | C2H5g22345 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| CX5g038787 | 5:15,855,596-15,861,094 | - | C1H5g14444 | C2H5g07557 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| CX5g037880 | 5:15,864,798-15,873,421 | + | C1H5g04632 | C2H5g06582 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| CX5g037525 | 5:15,886,032-15,886,886 | + | C1H5g17717 | C2H5g28202 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| CX5g038717 | 5:15,894,626-15,899,713 | + | C1H5g25353 | C2H5g02167 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| CX5g037050 | 5:15,908,866-15,910,035 | - | C1H5g07431 | C2H5g15789 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| CX5g041032 | 5:15,927,348-15,927,497 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g040255 | 5:15,945,521-15,945,688 | - | - | - | - | - | - | Detail |
| CX5g039068 | 5:15,947,009-15,951,303 | - | C1H5g07216 | C2H5g25950 | LOC_Os05g32500 | Os05g0391200 | - | Detail |
| CX5g037982 | 5:15,960,750-15,968,687 | + | C1H5g06208 | C2H5g11715 | LOC_Os05g32530 | Os05g0391500 | - | Detail |
| CX5g039136 | 5:15,972,460-15,980,441 | - | C1H5g19666 | C2H5g16821 | LOC_Os05g32544 | Os05g0391600 | OsXYXT2 | Detail |
| CX5g038331 | 5:16,003,530-16,015,170 | - | C1H5g12673 | C2H5g28005 | LOC_Os05g32570 | Os05g0392000 | - | Detail |