| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15398 | 2:23,307,236-23,312,726 | + | C1H2g25292 | CX2g019605 | LOC_Os02g41520 | Os02g0624400 | - | Detail |
| C2H2g09545 | 2:23,316,685-23,323,068 | + | C1H2g21346 | CX2g021076 | LOC_Os02g41550 | Os02g0625000 | - | Detail |
| C2H2g03881 | 2:23,325,318-23,326,799 | + | C1H2g19195 | CX2g022778 | LOC_Os02g41560 | Os02g0625100 | - | Detail |
| C2H2g18059 | 2:23,338,552-23,339,994 | + | C1H2g17897 | CX2g019216 | LOC_Os02g41580 | Os02g0625300 | - | Detail |
| C2H2g11933 | 2:23,344,561-23,350,244 | - | C1H2g11053 | CX2g019321 | LOC_Os02g41590 | Os02g0625500 | - | Detail |
| C2H2g22654 | 2:23,357,208-23,363,875 | + | C1H2g01239 | CX2g021369 | LOC_Os02g41610 | Os02g0625900 | - | Detail |
| C2H2g12458 | 2:23,373,856-23,377,779 | - | C1H2g24503 | CX2g019721 | LOC_Os02g41630 | Os02g0626100 | - | Detail |
| C2H2g01685 | 2:23,386,300-23,391,219 | - | C1H2g10363 | CX2g021604 | LOC_Os02g41650 | Os02g0626400 | - | Detail |
| C2H2g30462 | 2:23,394,640-23,396,781 | - | C1H2g23853 | CX2g023963 | LOC_Os02g41670 | Os02g0626600 | PAL3 | Detail |
| C2H2g15020 | 2:23,399,772-23,402,394 | - | C1H2g05283 | CX2g024160 | LOC_Os02g41680 | Os02g0627100 | OsPAL4 | Detail |
| C2H2g27127 | 2:23,422,550-23,425,349 | + | C1H2g07931 | CX2g021913 | LOC_Os02g41710 | Os02g0627700 | OsCNGC7 | Detail |
| C2H2g10818 | 2:23,426,658-23,427,514 | - | C1H2g13176 | CX2g021975 | LOC_Os02g41760 | Os02g0627900 | - | Detail |
| C2H2g11015 | 2:23,432,712-23,435,727 | + | C1H2g03519 | CX2g024868 | LOC_Os02g41770 | Os02g0628000 | - | Detail |
| C2H2g02567 | 2:23,436,281-23,436,529 | - | - | CX2g021292 | - | Os02g0628100 | - | Detail |
| C2H2g16036 | 2:23,441,908-23,445,862 | + | C1H2g23138 | CX2g021958 | LOC_Os02g41780 | Os02g0628200 | - | Detail |
| C2H2g16187 | 2:23,456,018-23,458,684 | + | C1H2g27536 | CX2g023005 | LOC_Os02g41800 | Os02g0628600 | - | Detail |
| C2H2g19637 | 2:23,471,815-23,472,036 | - | C1H11g05178 | CX2g020319 | LOC_Os02g41820 | Os02g0628800 | OsUBL5.1 | Detail |
| C2H2g07888 | 2:23,475,768-23,476,423 | + | - | - | LOC_Os02g41830 | Os02g0628900 | - | Detail |
| C2H2g29229 | 2:23,479,272-23,479,784 | - | - | CX2g022137 | LOC_Os02g41840 | Os02g0629000 | - | Detail |
| C2H2g09411 | 2:23,486,790-23,490,298 | + | C1H2g18314 | CX2g022423 | LOC_Os02g41860 | Os02g0629200 | OsPIP2;2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037221 | 5:15,758,693-15,762,309 | + | C1H5g02248 | C2H5g17569 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| CX5g038265 | 5:15,763,178-15,763,498 | + | - | - | - | - | - | Detail |
| CX5g040484 | 5:15,771,551-15,776,740 | + | C1H5g17467 | C2H5g24466 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| CX5g040873 | 5:15,798,157-15,802,246 | + | C1H5g20766 | C2H5g28293 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| CX5g037113 | 5:15,815,954-15,818,286 | - | C1H5g02261 | C2H5g13580 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| CX5g038872 | 5:15,818,925-15,821,355 | + | C1H5g02591 | C2H5g20984 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| CX5g040346 | 5:15,822,047-15,825,875 | - | C1H5g03931 | C2H5g00884 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| CX5g036712 | 5:15,840,658-15,844,004 | + | C1H5g01584 | C2H5g14052 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| CX5g040013 | 5:15,844,470-15,847,070 | - | C1H5g08791 | C2H5g22345 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| CX5g038787 | 5:15,855,596-15,861,094 | - | C1H5g14444 | C2H5g07557 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| CX5g037880 | 5:15,864,798-15,873,421 | + | C1H5g04632 | C2H5g06582 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| CX5g037525 | 5:15,886,032-15,886,886 | + | C1H5g17717 | C2H5g28202 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| CX5g038717 | 5:15,894,626-15,899,713 | + | C1H5g25353 | C2H5g02167 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| CX5g037050 | 5:15,908,866-15,910,035 | - | C1H5g07431 | C2H5g15789 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| CX5g041032 | 5:15,927,348-15,927,497 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g040255 | 5:15,945,521-15,945,688 | - | - | - | - | - | - | Detail |
| CX5g039068 | 5:15,947,009-15,951,303 | - | C1H5g07216 | C2H5g25950 | LOC_Os05g32500 | Os05g0391200 | - | Detail |
| CX5g037982 | 5:15,960,750-15,968,687 | + | C1H5g06208 | C2H5g11715 | LOC_Os05g32530 | Os05g0391500 | - | Detail |
| CX5g039136 | 5:15,972,460-15,980,441 | - | C1H5g19666 | C2H5g16821 | LOC_Os05g32544 | Os05g0391600 | OsXYXT2 | Detail |
| CX5g038331 | 5:16,003,530-16,015,170 | - | C1H5g12673 | C2H5g28005 | LOC_Os05g32570 | Os05g0392000 | - | Detail |