| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g01335 | 9:3,289,050-3,290,751 | - | C1H9g14985 | CX9g055027 | LOC_Os09g07020 | Os09g0245500 | - | Detail |
| C2H9g28734 | 9:3,292,410-3,297,012 | - | C1H9g14985 | CX9g055027 | LOC_Os09g07450 | Os09g0245500 | - | Detail |
| C2H9g02331 | 9:3,298,992-3,299,303 | - | C1H9g18619 | - | - | - | - | Detail |
| C2H9g06448 | 9:3,302,793-3,306,557 | - | C1H9g27878 | CX9g057597 | LOC_Os09g07460 | Os09g0249000 | - | Detail |
| C2H9g20745 | 9:3,316,134-3,319,656 | + | C1H9g24582 | CX9g056442 | LOC_Os09g07480 | Os09g0249400 | - | Detail |
| C2H9g06831 | 9:3,321,246-3,325,339 | - | C1H9g20835 | CX9g058158 | LOC_Os09g07500 | Os09g0249600 | - | Detail |
| C2H9g07458 | 9:3,328,817-3,335,150 | - | C1H9g20701 | CX9g054955 | LOC_Os09g07510 | Os09g0249700 | - | Detail |
| C2H9g12303 | 9:3,342,606-3,346,521 | + | C1H9g00474 | CX9g057433 | LOC_Os09g07570 | Os09g0249900 | - | Detail |
| C2H9g13423 | 9:3,347,479-3,356,560 | - | C1H9g08915 | CX9g058038 | LOC_Os09g07590 | - | - | Detail |
| C2H9g30220 | 9:3,451,766-3,453,788 | - | C1H9g11366 | - | - | - | - | Detail |
| C2H9g19501 | 9:3,461,474-3,475,487 | + | C1H9g03513 | CX9g055768 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| C2H9g12401 | 9:3,482,410-3,490,224 | + | C1H9g17448 | CX9g056142 | LOC_Os09g07660 | Os09g0250700 | - | Detail |
| C2H9g30619 | 9:3,496,448-3,499,501 | - | C1H9g00213 | CX9g056929 | LOC_Os09g07670 | Os09g0250800 | - | Detail |
| C2H9g12991 | 9:3,508,670-3,510,171 | - | C1H9g00213 | CX9g057043 | LOC_Os09g07700 | Os09g0250800 | - | Detail |
| C2H9g12996 | 9:3,524,430-3,525,449 | + | C1H9g26312 | CX9g056138 | LOC_Os09g07780 | Os09g0251500 | - | Detail |
| C2H9g15415 | 9:3,529,560-3,530,862 | + | C1H9g12000 | - | - | Os09g0251450 | - | Detail |
| C2H9g06665 | 9:3,550,379-3,554,009 | + | C1H9g31511 | CX9g057361 | LOC_Os09g07730 | Os09g0251100 | - | Detail |
| C2H9g25970 | 9:3,554,814-3,555,485 | + | C1H9g27075 | - | LOC_Os09g07720 | - | - | Detail |
| C2H9g10088 | 9:3,562,574-3,565,475 | + | C1H9g20803 | CX9g056095 | LOC_Os09g07800 | Os09g0251800 | - | Detail |
| C2H9g03841 | 9:3,572,171-3,575,276 | + | C1H9g11596 | CX9g056028 | LOC_Os09g07820 | Os09g0252000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037221 | 5:15,758,693-15,762,309 | + | C1H5g02248 | C2H5g17569 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| CX5g038265 | 5:15,763,178-15,763,498 | + | - | - | - | - | - | Detail |
| CX5g040484 | 5:15,771,551-15,776,740 | + | C1H5g17467 | C2H5g24466 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| CX5g040873 | 5:15,798,157-15,802,246 | + | C1H5g20766 | C2H5g28293 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| CX5g037113 | 5:15,815,954-15,818,286 | - | C1H5g02261 | C2H5g13580 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| CX5g038872 | 5:15,818,925-15,821,355 | + | C1H5g02591 | C2H5g20984 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| CX5g040346 | 5:15,822,047-15,825,875 | - | C1H5g03931 | C2H5g00884 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| CX5g036712 | 5:15,840,658-15,844,004 | + | C1H5g01584 | C2H5g14052 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| CX5g040013 | 5:15,844,470-15,847,070 | - | C1H5g08791 | C2H5g22345 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| CX5g038787 | 5:15,855,596-15,861,094 | - | C1H5g14444 | C2H5g07557 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| CX5g037880 | 5:15,864,798-15,873,421 | + | C1H5g04632 | C2H5g06582 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| CX5g037525 | 5:15,886,032-15,886,886 | + | C1H5g17717 | C2H5g28202 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| CX5g038717 | 5:15,894,626-15,899,713 | + | C1H5g25353 | C2H5g02167 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| CX5g037050 | 5:15,908,866-15,910,035 | - | C1H5g07431 | C2H5g15789 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| CX5g041032 | 5:15,927,348-15,927,497 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g040255 | 5:15,945,521-15,945,688 | - | - | - | - | - | - | Detail |
| CX5g039068 | 5:15,947,009-15,951,303 | - | C1H5g07216 | C2H5g25950 | LOC_Os05g32500 | Os05g0391200 | - | Detail |
| CX5g037982 | 5:15,960,750-15,968,687 | + | C1H5g06208 | C2H5g11715 | LOC_Os05g32530 | Os05g0391500 | - | Detail |
| CX5g039136 | 5:15,972,460-15,980,441 | - | C1H5g19666 | C2H5g16821 | LOC_Os05g32544 | Os05g0391600 | OsXYXT2 | Detail |
| CX5g038331 | 5:16,003,530-16,015,170 | - | C1H5g12673 | C2H5g28005 | LOC_Os05g32570 | Os05g0392000 | - | Detail |