| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12537 | 1:28,059,267-28,062,753 | - | C2H1g29243 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C1H1g02730 | 1:28,066,645-28,070,053 | - | C2H1g03544 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C1H1g08638 | 1:28,082,378-28,082,850 | - | C2H1g05225 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C1H1g13664 | 1:28,092,625-28,094,528 | + | C2H1g14203 | CX1g004570 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| C1H1g18862 | 1:28,095,179-28,096,887 | - | C2H1g17996 | CX1g000494 | LOC_Os01g40070 | Os01g0872900 | - | Detail |
| C1H1g01804 | 1:28,098,181-28,099,979 | + | C2H1g14203 | CX1g004570 | LOC_Os12g07180 | Os01g0527900 | - | Detail |
| C1H1g18828 | 1:28,111,705-28,119,738 | + | C2H1g04914 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C1H1g01340 | 1:28,124,308-28,126,973 | - | C2H1g10063 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C1H1g28508 | 1:28,129,725-28,131,757 | + | C2H1g08663 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C1H1g19975 | 1:28,131,889-28,135,998 | - | C2H1g27818 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C1H1g04449 | 1:28,138,360-28,140,062 | - | C2H1g21432 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C1H1g25368 | 1:28,142,139-28,143,928 | - | C2H1g04122 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C1H1g06182 | 1:28,148,730-28,154,643 | - | C2H1g02082 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| C1H1g10866 | 1:28,154,876-28,162,682 | + | C2H1g30106 | CX1g004902 | LOC_Os01g54910 | Os01g0752700 | - | Detail |
| C1H1g19556 | 1:28,164,498-28,168,140 | + | C2H1g14113 | - | LOC_Os01g54980 | Os01g0753400 | - | Detail |
| C1H1g31047 | 1:28,169,347-28,172,826 | + | C2H1g30674 | CX1g005633 | LOC_Os01g47530 | Os01g0897000 | OsCDKB1;1 | Detail |
| C1H1g19883 | 1:28,173,278-28,177,088 | - | C2H1g22228 | CX1g003710 | LOC_Os01g54920 | Os01g0752800 | - | Detail |
| C1H1g05885 | 1:28,178,297-28,184,905 | - | C2H1g29792 | CX1g004059 | LOC_Os01g54930 | Os01g0753000 | OsVOZ1 | Detail |
| C1H1g21710 | 1:28,187,878-28,193,077 | + | C2H1g17930 | CX1g000869 | LOC_Os01g54940 | Os01g0753100 | - | Detail |
| C1H1g22929 | 1:28,193,865-28,196,051 | - | C2H1g29811 | CX1g006390 | LOC_Os01g54950 | Os01g0753150 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037221 | 5:15,758,693-15,762,309 | + | C1H5g02248 | C2H5g17569 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| CX5g038265 | 5:15,763,178-15,763,498 | + | - | - | - | - | - | Detail |
| CX5g040484 | 5:15,771,551-15,776,740 | + | C1H5g17467 | C2H5g24466 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| CX5g040873 | 5:15,798,157-15,802,246 | + | C1H5g20766 | C2H5g28293 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| CX5g037113 | 5:15,815,954-15,818,286 | - | C1H5g02261 | C2H5g13580 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| CX5g038872 | 5:15,818,925-15,821,355 | + | C1H5g02591 | C2H5g20984 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| CX5g040346 | 5:15,822,047-15,825,875 | - | C1H5g03931 | C2H5g00884 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| CX5g036712 | 5:15,840,658-15,844,004 | + | C1H5g01584 | C2H5g14052 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| CX5g040013 | 5:15,844,470-15,847,070 | - | C1H5g08791 | C2H5g22345 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| CX5g038787 | 5:15,855,596-15,861,094 | - | C1H5g14444 | C2H5g07557 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| CX5g037880 | 5:15,864,798-15,873,421 | + | C1H5g04632 | C2H5g06582 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| CX5g037525 | 5:15,886,032-15,886,886 | + | C1H5g17717 | C2H5g28202 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| CX5g038717 | 5:15,894,626-15,899,713 | + | C1H5g25353 | C2H5g02167 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| CX5g037050 | 5:15,908,866-15,910,035 | - | C1H5g07431 | C2H5g15789 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| CX5g041032 | 5:15,927,348-15,927,497 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g040255 | 5:15,945,521-15,945,688 | - | - | - | - | - | - | Detail |
| CX5g039068 | 5:15,947,009-15,951,303 | - | C1H5g07216 | C2H5g25950 | LOC_Os05g32500 | Os05g0391200 | - | Detail |
| CX5g037982 | 5:15,960,750-15,968,687 | + | C1H5g06208 | C2H5g11715 | LOC_Os05g32530 | Os05g0391500 | - | Detail |
| CX5g039136 | 5:15,972,460-15,980,441 | - | C1H5g19666 | C2H5g16821 | LOC_Os05g32544 | Os05g0391600 | OsXYXT2 | Detail |
| CX5g038331 | 5:16,003,530-16,015,170 | - | C1H5g12673 | C2H5g28005 | LOC_Os05g32570 | Os05g0392000 | - | Detail |