| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24456 | 4:15,350,612-15,355,045 | + | - | - | - | Os10g0428200 | - | Detail |
| C1H4g03298 | 4:15,359,042-15,360,166 | - | - | - | - | - | - | Detail |
| C1H4g24659 | 4:15,361,887-15,362,761 | - | - | - | - | - | - | Detail |
| C1H4g20870 | 4:15,442,918-15,443,955 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30160 | Os04g0370100 | - | Detail |
| C1H4g27310 | 4:15,444,139-15,445,422 | - | C2H4g11929 | - | - | - | - | Detail |
| C1H4g13550 | 4:15,457,825-15,458,796 | - | C2H4g27695 | CX4g033563 | LOC_Os04g30270 | Os04g0371200 | - | Detail |
| C1H4g00940 | 4:15,466,052-15,468,169 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30280 | Os04g0368000 | - | Detail |
| C1H4g15913 | 4:15,578,726-15,581,968 | + | C2H4g02498 | CX4g031772 | LOC_Os04g30420 | Os04g0372700 | - | Detail |
| C1H4g23526 | 4:15,582,279-15,587,129 | - | C2H4g10957 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C1H4g19886 | 4:15,593,804-15,594,498 | + | C2H4g23915 | - | - | - | - | Detail |
| C1H4g17345 | 4:15,595,574-15,598,445 | + | C2H4g15991 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C1H4g15354 | 4:15,602,056-15,603,672 | + | C2H4g25729 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C1H4g23534 | 4:15,616,897-15,620,151 | + | C2H4g27653 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C1H4g04442 | 4:15,660,626-15,663,910 | + | C2H4g16321 | CX4g032818 | LOC_Os04g30540 | Os04g0374000 | - | Detail |
| C1H4g28100 | 4:15,684,372-15,689,384 | - | - | - | - | - | - | Detail |
| C1H4g09226 | 4:15,692,550-15,695,774 | + | C2H4g25498 | CX4g032818 | LOC_Os04g30610 | Os04g0374000 | - | Detail |
| C1H4g09945 | 4:15,698,998-15,703,545 | - | C2H4g15638 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C1H4g09093 | 4:15,706,954-15,708,660 | - | C2H4g24509 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C1H4g14613 | 4:15,709,368-15,712,980 | - | C2H4g23366 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C1H4g11665 | 4:15,715,342-15,716,102 | + | C2H4g02514 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038438 | 5:15,354,256-15,355,986 | + | C1H5g15942 | C2H5g14904 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| CX5g037505 | 5:15,371,165-15,371,602 | - | C1H5g26766 | C2H5g05514 | LOC_Os05g31470 | - | - | Detail |
| CX5g040361 | 5:15,378,940-15,383,334 | - | C1H5g21416 | C2H5g07919 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| CX5g038969 | 5:15,384,279-15,388,620 | - | C1H5g03148 | C2H5g27417 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| CX5g040592 | 5:15,400,250-15,400,870 | + | - | - | LOC_Os05g31525 | - | - | Detail |
| CX5g039321 | 5:15,402,856-15,412,089 | + | C1H5g28359 | C2H5g19061 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| CX5g040570 | 5:15,413,084-15,417,388 | + | C1H5g06063 | C2H5g30556 | LOC_Os05g31610 | Os05g0380800 | - | Detail |
| CX5g037649 | 5:15,422,329-15,422,925 | - | C1H5g05054 | C2H5g18251 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| CX5g036933 | 5:15,442,907-15,443,404 | - | C1H5g03678 | C2H5g02851 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| CX5g040874 | 5:15,446,410-15,450,455 | + | C1H5g22192 | C2H5g00812 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| CX5g041023 | 5:15,462,244-15,464,784 | + | C1H5g26855 | - | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| CX5g038575 | 5:15,478,836-15,481,013 | + | C1H5g18693 | C2H5g07422 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| CX5g038480 | 5:15,484,799-15,485,128 | + | - | - | - | Os10g0131550 | - | Detail |
| CX5g037534 | 5:15,501,529-15,505,530 | - | C1H5g14307 | C2H5g08328 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| CX5g036798 | 5:15,511,675-15,513,269 | + | C1H5g04280 | C2H5g19880 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| CX5g040199 | 5:15,518,028-15,518,330 | + | C1H5g11289 | C2H5g17544 | LOC_Os05g32640 | - | - | Detail |
| CX5g040387 | 5:15,520,604-15,521,948 | - | C1H5g01406 | C2H5g19685 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| CX5g039703 | 5:15,525,692-15,527,761 | + | C1H5g16657 | C2H5g11708 | LOC_Os05g31760 | Os05g0382900 | - | Detail |
| CX5g037302 | 5:15,528,172-15,530,750 | - | C1H5g24084 | C2H5g06666 | LOC_Os05g31770 | Os05g0383000 | - | Detail |
| CX5g037753 | 5:15,533,237-15,536,952 | - | C1H5g11233 | C2H5g25307 | LOC_Os05g31780 | Os05g0383100 | - | Detail |