| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02659 | 2:21,650,013-21,652,314 | + | C1H2g31252 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C2H2g02107 | 2:21,652,904-21,658,629 | - | C1H2g28738 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C2H2g27414 | 2:21,662,462-21,666,899 | + | C1H2g05228 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C2H2g28617 | 2:21,671,276-21,676,533 | + | C1H2g19613 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C2H2g22920 | 2:21,706,647-21,709,519 | + | C1H2g26025 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C2H2g27568 | 2:21,725,819-21,728,861 | - | C1H2g03331 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C2H2g08333 | 2:21,734,849-21,737,047 | - | C1H2g12247 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C2H2g24282 | 2:21,748,043-21,751,282 | - | C1H2g09203 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C2H2g12684 | 2:21,768,658-21,769,571 | - | C1H2g18043 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C2H2g27779 | 2:21,773,593-21,777,440 | - | C1H2g28766 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C2H2g13918 | 2:21,783,398-21,787,026 | + | C1H2g15529 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C2H2g12990 | 2:21,788,231-21,789,893 | - | C1H2g13753 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C2H2g05640 | 2:21,794,766-21,797,513 | - | C1H2g12816 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C2H2g05424 | 2:21,799,545-21,808,652 | - | C1H2g21293 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| C2H2g17152 | 2:21,810,292-21,812,161 | + | C1H2g16769 | CX2g020902 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| C2H2g16801 | 2:21,813,661-21,815,350 | - | C1H2g16904 | - | - | - | - | Detail |
| C2H2g06504 | 2:21,815,761-21,817,377 | - | C1H2g00956 | CX2g024363 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| C2H2g01473 | 2:21,820,091-21,820,710 | - | - | - | - | - | - | Detail |
| C2H2g22627 | 2:21,823,310-21,826,480 | - | C1H2g15841 | CX2g024642 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| C2H2g25090 | 2:21,827,821-21,828,330 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039377 | 5:14,764,741-14,767,872 | - | C1H5g31214 | C2H5g26184 | LOC_Os05g30420 | Os05g0367100 | - | Detail |
| CX5g039616 | 5:14,770,104-14,773,341 | - | C1H5g00883 | C2H5g02529 | LOC_Os05g30430 | Os05g0367200 | - | Detail |
| CX5g039728 | 5:14,776,280-14,780,869 | - | C1H5g12306 | C2H5g17178 | LOC_Os05g30454 | Os05g0367400 | - | Detail |
| CX5g039546 | 5:14,781,687-14,781,950 | - | C1H5g08001 | - | - | - | - | Detail |
| CX5g038979 | 5:14,783,557-14,784,189 | - | - | - | LOC_Os05g30540 | - | - | Detail |
| CX5g037627 | 5:14,799,618-14,799,785 | - | - | - | - | - | - | Detail |
| CX5g037919 | 5:14,805,797-14,807,779 | - | C1H5g12703 | C2H5g26795 | LOC_Os05g30480 | Os05g0367800 | - | Detail |
| CX5g039519 | 5:14,810,660-14,811,457 | + | C1H5g01473 | - | LOC_Os05g30490 | Os05g0367900 | - | Detail |
| CX5g038959 | 5:14,826,970-14,827,569 | + | C1H5g05551 | - | LOC_Os05g30510 | Os05g0368100 | - | Detail |
| CX5g040538 | 5:14,833,945-14,834,196 | - | C1H5g31326 | - | - | - | - | Detail |
| CX5g037254 | 5:14,838,868-14,840,954 | + | C1H5g00243 | C2H5g30138 | LOC_Os05g30530 | Os05g0368300 | - | Detail |
| CX5g040245 | 5:14,847,755-14,849,142 | - | C1H5g14118 | C2H5g28548 | LOC_Os05g30570 | Os05g0368600 | - | Detail |
| CX5g037908 | 5:14,857,238-14,859,568 | + | C1H5g01731 | C2H5g18314 | LOC_Os05g30580 | Os05g0368700 | - | Detail |
| CX5g037003 | 5:14,907,345-14,908,084 | + | - | C2H5g15153 | - | - | - | Detail |
| CX5g039995 | 5:14,916,551-14,919,088 | + | C1H5g31441 | C2H5g21027 | - | Os05g0218001 | - | Detail |
| CX5g038193 | 5:14,920,978-14,922,862 | + | C1H5g30956 | C2H5g25639 | LOC_Os05g30700 | Os05g0369900 | OsEXO70FX1 | Detail |
| CX5g037073 | 5:14,925,004-14,926,995 | - | C1H5g03896 | C2H5g22995 | LOC_Os05g30710 | Os05g0370000 | - | Detail |
| CX5g037104 | 5:14,939,943-14,941,934 | - | C1H5g03131 | C2H5g22995 | LOC_Os05g30710 | Os05g0370000 | - | Detail |
| CX5g036764 | 5:14,949,690-14,950,412 | - | C1H5g23912 | - | LOC_Os05g30740 | Os05g0370300 | - | Detail |
| CX5g038684 | 5:14,959,990-14,961,828 | + | C1H5g17728 | C2H5g17041 | LOC_Os05g30750 | Os05g0370600 | OsFTIP7 | Detail |