| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g25885 | 2:511,212-511,736 | + | C2H2g09423 | CX2g023145 | - | Os02g0144300 | - | Detail |
| C1H2g28737 | 2:512,219-528,456 | - | C2H2g11436 | CX2g020170 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| C1H2g23635 | 2:534,022-539,607 | + | C2H2g03291 | - | - | - | - | Detail |
| C1H2g03642 | 2:542,529-550,508 | + | C2H2g28219 | CX2g024805 | LOC_Os02g02110 | - | - | Detail |
| C1H2g03397 | 2:547,047-550,223 | - | C2H2g25923 | CX2g023278 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| C1H2g11275 | 2:551,548-553,597 | + | C2H2g00106 | CX2g022213 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| C1H2g19068 | 2:557,087-560,215 | - | C2H2g09655 | CX2g021036 | LOC_Os02g02140 | Os02g0111800 | - | Detail |
| C1H2g08619 | 2:566,450-569,233 | + | C2H2g07259 | CX2g020132 | LOC_Os02g02150 | Os02g0111900 | - | Detail |
| C1H2g30533 | 2:570,769-571,595 | - | C2H2g15382 | CX2g024174 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| C1H2g03728 | 2:574,795-576,396 | + | - | CX2g024535 | LOC_Os02g02190 | Os02g0112600 | NRT2.2, OsNRT2.2, OsNRT2.1 | Detail |
| C1H2g31025 | 2:586,167-587,768 | - | - | CX2g024535 | LOC_Os02g02190 | Os02g0112100 | NRT2.1, OsNRT2.1, OsNRT2.2 | Detail |
| C1H2g07735 | 2:591,979-603,893 | - | C2H2g17743 | CX2g019924 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |
| C1H2g27463 | 2:619,875-623,681 | + | C2H2g20495 | CX2g023815 | LOC_Os02g02230 | Os02g0113200 | - | Detail |
| C1H2g00775 | 2:625,195-626,864 | + | C2H2g03042 | CX2g022139 | LOC_Os02g02270 | Os02g0113800 | - | Detail |
| C1H2g15227 | 2:627,487-628,048 | + | C2H2g10635 | - | - | - | - | Detail |
| C1H2g19532 | 2:628,835-639,667 | - | C2H2g25057 | CX2g019365 | LOC_Os02g02290 | Os02g0114000 | OsBRM | Detail |
| C1H2g15650 | 2:643,748-645,076 | - | C2H2g11144 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g07896 | 2:645,154-645,375 | - | C2H2g30135 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g30436 | 2:648,161-652,853 | - | C2H2g25462 | CX2g024695 | LOC_Os02g02320 | Os02g0114200 | - | Detail |
| C1H2g22369 | 2:655,775-656,005 | + | - | CX2g023221 | LOC_Os02g02330 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000938 | 1:22,477,008-22,477,160 | + | - | - | - | - | - | Detail |
| CX1g003323 | 1:22,481,913-22,485,726 | + | C1H1g00319 | C2H1g20706 | LOC_Os01g43580 | Os01g0625200 | - | Detail |
| CX1g003980 | 1:22,490,934-22,491,936 | + | C1H1g14466 | C2H1g04036 | LOC_Os01g43590 | Os01g0625300 | - | Detail |
| CX1g006019 | 1:22,502,616-22,503,719 | - | C1H1g04807 | - | LOC_Os01g43610 | Os01g0625900 | OsOFP2, OsOFP03, OFP2 | Detail |
| CX1g000808 | 1:22,504,664-22,505,026 | - | - | - | LOC_Os01g46900 | - | - | Detail |
| CX1g000927 | 1:22,505,772-22,505,930 | - | - | - | - | - | - | Detail |
| CX1g004459 | 1:22,518,512-22,526,695 | + | C1H1g10500 | C2H1g29248 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| CX1g003074 | 1:22,528,240-22,528,482 | - | C1H1g23387 | C2H1g04282 | - | Os01g0626300 | - | Detail |
| CX1g001615 | 1:22,533,457-22,535,691 | + | C1H1g04034 | C2H1g17198 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| CX1g004366 | 1:22,537,915-22,538,067 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g004444 | 1:22,547,588-22,548,427 | + | C1H1g09859 | C2H1g05125 | LOC_Os01g43670 | Os01g0902300 | - | Detail |
| CX1g003365 | 1:22,551,055-22,551,792 | - | C1H1g14773 | - | LOC_Os01g43680 | Os01g0626900 | - | Detail |
| CX1g002724 | 1:22,564,349-22,567,731 | - | C1H1g28702 | C2H1g19850 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| CX1g006577 | 1:22,575,415-22,577,402 | - | C1H1g03097 | C2H1g29868 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| CX1g003827 | 1:22,617,703-22,625,842 | + | C1H1g21541 | C2H1g04659 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| CX1g005910 | 1:22,629,420-22,629,593 | + | - | - | - | - | - | Detail |
| CX1g000972 | 1:22,629,778-22,636,629 | + | C1H1g08197 | C2H1g01356 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| CX1g002102 | 1:22,641,572-22,642,930 | + | C1H1g26345 | C2H1g15801 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| CX1g001277 | 1:22,645,266-22,645,502 | - | - | - | - | - | - | Detail |
| CX1g006840 | 1:22,647,634-22,652,290 | - | C1H1g14568 | C2H1g07937 | LOC_Os01g43910 | Os01g0629900 | - | Detail |