| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07939 | 1:30,166,036-30,168,196 | - | C1H1g19538 | CX1g005593 | LOC_Os01g58730 | Os01g0801500 | - | Detail |
| C2H1g30108 | 1:30,168,609-30,171,707 | - | C1H1g05474 | CX1g003950 | LOC_Os01g58740 | Os01g0801600 | - | Detail |
| C2H1g26051 | 1:30,172,897-30,176,258 | - | C1H1g14045 | CX1g005695 | LOC_Os01g58750 | Os01g0801700 | OsGCD1 | Detail |
| C2H1g19105 | 1:30,182,459-30,184,419 | - | - | - | - | - | - | Detail |
| C2H1g24587 | 1:30,197,757-30,202,818 | + | C1H1g01326 | CX1g000361 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| C2H1g08686 | 1:30,216,620-30,218,774 | - | C1H1g15075 | CX1g002565 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| C2H1g30330 | 1:30,232,946-30,233,720 | + | C1H1g24422 | CX1g002172 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| C2H1g25597 | 1:30,243,490-30,245,237 | - | C1H1g07293 | CX1g000223 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| C2H1g05023 | 1:30,257,504-30,259,030 | + | C1H1g24602 | CX1g005013 | LOC_Os01g58960 | Os01g0803800 | CYP94D12, OsCYP94D12 | Detail |
| C2H1g26033 | 1:30,261,999-30,263,537 | + | C1H1g19345 | CX1g005013 | LOC_Os01g58970 | Os01g0803900 | CYP94D11, OsCYP94D11, OsCYPq1 | Detail |
| C2H1g28126 | 1:30,286,808-30,288,426 | - | C1H1g26715 | CX1g005195 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| C2H1g18483 | 1:30,291,209-30,292,424 | - | C1H1g02848 | CX1g000028 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| C2H1g25136 | 1:30,292,535-30,298,269 | + | C1H1g13654 | CX1g000520 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| C2H1g18311 | 1:30,299,357-30,299,566 | - | C1H12g00195 | - | - | - | - | Detail |
| C2H1g25416 | 1:30,299,605-30,300,492 | - | - | CX1g005761 | - | - | - | Detail |
| C2H1g00011 | 1:30,300,738-30,301,334 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05127 | 1:30,302,551-30,303,204 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05794 | 1:30,303,559-30,306,662 | - | C1H1g31482 | CX1g004982 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| C2H1g03484 | 1:30,307,605-30,313,872 | - | C1H1g30942 | CX1g001600 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| C2H1g17768 | 1:30,315,471-30,319,142 | - | C1H1g01953 | CX1g000155 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037323 | 5:13,733,812-13,735,233 | - | C1H5g27836 | C2H5g21599 | LOC_Os05g28190 | Os05g0349500 | - | Detail |
| CX5g038933 | 5:13,734,077-13,734,760 | + | - | - | - | Os05g0349600 | - | Detail |
| CX5g039025 | 5:13,740,695-13,746,084 | + | C1H5g13828 | C2H5g06848 | LOC_Os05g28200 | Os05g0349700 | - | Detail |
| CX5g036783 | 5:13,747,637-13,748,028 | - | C1H5g05895 | C2H5g23580 | LOC_Os05g28210 | Os05g0349800 | - | Detail |
| CX5g039857 | 5:13,771,111-13,774,287 | + | C1H5g14457 | C2H5g29583 | LOC_Os05g28280 | Os05g0350500 | - | Detail |
| CX5g039007 | 5:13,778,197-13,780,311 | + | C1H5g17562 | C2H5g21599 | LOC_Os05g28290 | Os05g0350600 | - | Detail |
| CX5g037642 | 5:13,785,242-13,794,633 | + | C1H5g16123 | C2H5g07484 | LOC_Os05g28300 | Os05g0350700 | - | Detail |
| CX5g040736 | 5:13,799,548-13,800,304 | - | C1H5g17008 | C2H5g28285 | LOC_Os05g28320 | Os05g0350900 | Os2R_MYB54 | Detail |
| CX5g038612 | 5:13,816,849-13,817,652 | - | C1H5g12930 | C2H5g09274 | LOC_Os05g28350 | Os05g0351200 | - | Detail |
| CX5g039433 | 5:13,822,884-13,823,111 | + | - | - | LOC_Os05g32930 | - | - | Detail |
| CX5g038755 | 5:13,840,989-13,841,629 | - | C1H5g29097 | C2H5g17200 | LOC_Os05g28370 | Os05g0351500 | - | Detail |
| CX5g040675 | 5:13,847,299-13,847,592 | + | - | - | - | - | - | Detail |
| CX5g039488 | 5:13,862,943-13,867,283 | + | C1H5g24445 | C2H5g14159 | LOC_Os05g28460 | Os05g0352700 | - | Detail |
| CX5g039121 | 5:13,869,133-13,871,088 | + | C1H5g20523 | C2H5g18746 | - | - | - | Detail |
| CX5g040724 | 5:13,875,120-13,875,651 | - | C1H11g11076 | - | - | - | - | Detail |
| CX5g038297 | 5:13,877,501-13,879,263 | + | C1H5g18199 | C2H5g08977 | LOC_Os05g28470 | Os05g0352750 | - | Detail |
| CX5g037212 | 5:13,888,721-13,893,391 | + | C1H5g31266 | C2H5g16901 | LOC_Os05g28500 | Os05g0353300 | - | Detail |
| CX5g036875 | 5:13,899,322-13,903,784 | + | C1H5g01450 | C2H5g04356 | LOC_Os05g28510 | Os05g0353400 | - | Detail |
| CX5g037535 | 5:13,904,752-13,907,436 | - | C1H5g21568 | C2H5g23280 | LOC_Os05g28520 | Os05g0353500 | - | Detail |
| CX5g040408 | 5:13,911,324-13,911,488 | + | - | - | - | - | - | Detail |