| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17831 | 1:36,696,932-36,698,905 | - | C1H1g14395 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C2H1g21755 | 1:36,705,242-36,709,576 | + | C1H1g19591 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C2H1g29286 | 1:36,710,705-36,724,570 | + | C1H1g21264 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C2H1g28290 | 1:36,724,845-36,729,879 | + | C1H1g12592 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C2H1g22141 | 1:36,757,996-36,760,764 | + | C1H1g26080 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C2H1g01876 | 1:36,763,587-36,766,798 | - | C1H1g08967 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C2H1g23541 | 1:36,769,292-36,769,639 | - | C1H1g08967 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C2H1g06863 | 1:36,790,745-36,791,275 | + | C1H1g04585 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C2H1g01858 | 1:36,794,410-36,796,131 | + | C1H1g16091 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C2H1g03308 | 1:36,797,876-36,799,254 | + | C1H1g10602 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C2H1g26876 | 1:36,803,685-36,804,841 | + | C1H1g16335 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C2H1g01984 | 1:36,808,469-36,809,631 | + | C1H1g16091 | CX1g004707 | LOC_Os01g71400 | Os01g0944500 | - | Detail |
| C2H1g16744 | 1:36,812,907-36,814,022 | + | C1H1g17272 | CX1g004794 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| C2H1g10883 | 1:36,817,679-36,819,593 | - | C1H1g10405 | CX1g000710 | LOC_Os01g71420 | Os01g0941800 | - | Detail |
| C2H1g22406 | 1:36,826,438-36,827,760 | - | C1H1g13310 | CX1g006806 | LOC_Os01g71460 | Os01g0942200 | - | Detail |
| C2H1g09469 | 1:36,828,146-36,831,987 | - | C1H1g19466 | CX1g002838 | LOC_Os01g71474 | Os01g0942300 | OsEGL2 | Detail |
| C2H1g19657 | 1:36,839,238-36,841,002 | - | C1H1g16335 | CX1g004794 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C2H1g18324 | 1:36,842,401-36,843,306 | - | C1H1g09892 | CX1g004621 | LOC_Os01g71680 | Os01g0944800 | - | Detail |
| C2H1g11627 | 1:36,845,182-36,846,153 | - | C1H1g23548 | CX1g003176 | LOC_Os01g71690 | Os01g0947000 | - | Detail |
| C2H1g30428 | 1:36,847,690-36,851,615 | - | C1H1g21476 | CX1g004650 | LOC_Os01g71690 | Os01g0945001 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037571 | 5:13,071,009-13,071,401 | + | - | - | - | - | - | Detail |
| CX5g039023 | 5:13,089,141-13,091,791 | - | C1H5g09873 | C2H5g13294 | LOC_Os05g26926 | Os05g0334400 | OsDjA8, OsDjA7/8 | Detail |
| CX5g038083 | 5:13,096,968-13,097,279 | - | - | - | - | Os05g0333600 | - | Detail |
| CX5g039430 | 5:13,101,602-13,102,930 | - | C1H5g26652 | C2H5g05539 | LOC_Os05g26940 | Os05g0334750 | - | Detail |
| CX5g039567 | 5:13,108,869-13,112,681 | - | C1H5g14628 | C2H5g00998 | LOC_Os05g26954 | Os05g0335100 | - | Detail |
| CX5g037342 | 5:13,116,003-13,116,443 | - | - | - | - | - | - | Detail |
| CX5g039300 | 5:13,127,820-13,128,425 | + | C1H5g28741 | C2H5g01656 | LOC_Os05g27000 | Os05g0335500 | - | Detail |
| CX5g039294 | 5:13,137,437-13,145,995 | - | C1H5g13136 | C2H5g11593 | LOC_Os05g27010 | Os05g0335800 | - | Detail |
| CX5g040542 | 5:13,159,619-13,161,133 | - | C1H5g08274 | C2H5g29679 | LOC_Os05g27090 | Os05g0337200 | - | Detail |
| CX5g039250 | 5:13,172,289-13,172,553 | - | - | - | - | Os01g0612350 | - | Detail |
| CX5g038207 | 5:13,176,438-13,179,167 | - | C1H5g13307 | C2H5g27066 | LOC_Os05g27100 | Os05g0337400 | - | Detail |
| CX5g040786 | 5:13,181,162-13,181,461 | - | - | - | - | - | - | Detail |
| CX5g040973 | 5:13,227,365-13,236,391 | + | C1H5g16890 | C2H5g06947 | LOC_Os05g27304 | Os05g0338900 | - | Detail |
| CX5g040584 | 5:13,237,068-13,243,268 | - | C1H5g20164 | C2H5g16002 | LOC_Os05g27320 | Os05g0339000 | - | Detail |
| CX5g040172 | 5:13,243,807-13,243,974 | + | - | - | - | - | - | Detail |
| CX5g039225 | 5:13,252,805-13,254,239 | + | C1H5g07750 | C2H5g15328 | LOC_Os05g27340 | Os05g0339200 | - | Detail |
| CX5g040819 | 5:13,264,254-13,264,537 | + | - | - | - | - | - | Detail |
| CX5g039744 | 5:13,277,262-13,277,441 | + | - | - | - | Os02g0188201 | - | Detail |
| CX5g037597 | 5:13,285,788-13,286,651 | - | C1H5g30721 | - | LOC_Os01g05770 | Os01g0150950 | - | Detail |
| CX5g036883 | 5:13,289,739-13,292,650 | + | C1H5g05577 | C2H5g14220 | LOC_Os05g27500 | Os05g0341100 | - | Detail |