| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18413 | 4:29,693,561-29,699,613 | - | C1H4g12099 | CX4g034422 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| C2H4g13935 | 4:29,701,445-29,704,747 | + | C1H4g02898 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C2H4g25125 | 4:29,705,783-29,708,184 | + | C1H4g21333 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C2H4g28032 | 4:29,709,880-29,714,931 | - | C1H4g29753 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C2H4g17256 | 4:29,737,558-29,738,174 | + | C1H4g17441 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C2H4g16666 | 4:29,745,422-29,749,700 | - | C1H4g06545 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C2H4g21541 | 4:29,752,035-29,752,662 | - | C1H4g12522 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C2H4g03386 | 4:29,757,348-29,758,304 | - | C1H4g09977 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| C2H4g22422 | 4:29,766,013-29,768,955 | - | C1H4g25879 | CX4g033668 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| C2H4g06265 | 4:29,774,553-29,775,787 | + | C1H4g19205 | CX4g033580 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| C2H4g15166 | 4:29,776,488-29,781,050 | - | C1H4g22285 | CX4g034130 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| C2H4g17817 | 4:29,783,015-29,783,610 | - | C1H4g01102 | - | - | Os04g0674350 | - | Detail |
| C2H4g23831 | 4:29,783,738-29,786,479 | + | C1H4g13095 | CX4g032486 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |
| C2H4g13778 | 4:29,789,504-29,794,076 | + | C1H4g14562 | CX4g036032 | LOC_Os04g57819 | Os04g0674450 | - | Detail |
| C2H4g19163 | 4:29,798,804-29,801,306 | + | C1H4g20705 | - | - | - | - | Detail |
| C2H4g22750 | 4:29,802,403-29,805,885 | - | C1H4g25678 | CX4g034412 | LOC_Os04g57840 | Os04g0674600 | - | Detail |
| C2H4g08185 | 4:29,806,506-29,808,620 | - | C1H4g14424 | CX4g034499 | LOC_Os04g57850 | Os04g0674700 | OsBIABP1 | Detail |
| C2H4g18901 | 4:29,812,600-29,815,642 | - | C1H4g31604 | CX4g031749 | LOC_Os04g57860 | Os04g0674800 | OsRHC | Detail |
| C2H4g07191 | 4:29,818,808-29,824,861 | - | C1H4g22329 | CX4g034095 | LOC_Os04g57870 | Os04g0675000 | - | Detail |
| C2H4g13536 | 4:29,834,270-29,853,732 | + | C1H4g08555 | CX4g033430 | - | Os04g0675300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040032 | 5:12,761,575-12,761,844 | - | - | - | LOC_Os05g25920 | Os05g0324700 | - | Detail |
| CX5g039730 | 5:12,827,621-12,828,392 | - | C1H5g09881 | - | LOC_Os05g26070 | Os05g0327000 | - | Detail |
| CX5g038790 | 5:12,850,828-12,851,052 | - | C1H4g09455 | C2H12g12031 | LOC_Os02g17030 | - | - | Detail |
| CX5g038425 | 5:12,879,437-12,879,799 | - | - | - | LOC_Os05g26194 | Os05g0328000 | - | Detail |
| CX5g039166 | 5:12,885,593-12,886,141 | + | C1H5g28898 | - | LOC_Os05g26210 | Os05g0328300 | - | Detail |
| CX5g040593 | 5:12,933,743-12,939,275 | + | C1H5g29790 | C2H5g20535 | LOC_Os05g26770 | Os05g0330150 | - | Detail |
| CX5g041047 | 5:12,945,254-12,945,457 | - | - | - | LOC_Os05g26630 | - | - | Detail |
| CX5g040367 | 5:12,945,483-12,945,716 | - | C1H5g12231 | - | - | Os05g0330700 | - | Detail |
| CX5g041064 | 5:12,950,004-12,955,532 | - | C1H5g26352 | C2H5g11759 | LOC_Os05g26660 | Os05g0331200 | OsNDB2 | Detail |
| CX5g038329 | 5:12,958,328-12,958,681 | - | - | C2H7g19391 | LOC_Os05g26670 | Os01g0647800 | - | Detail |
| CX5g036904 | 5:12,971,690-12,974,728 | - | C1H5g18321 | C2H5g20535 | LOC_Os05g26720 | Os05g0329350 | - | Detail |
| CX5g037453 | 5:12,979,729-12,980,190 | - | C1H5g05804 | C2H5g20535 | LOC_Os05g26620 | Os05g0328632 | - | Detail |
| CX5g038066 | 5:12,996,352-12,999,554 | - | C1H5g09865 | C2H5g05869 | LOC_Os05g26810 | Os05g0332250 | - | Detail |
| CX5g037948 | 5:13,004,892-13,006,097 | + | C1H5g07404 | C2H5g16830 | LOC_Os05g26820 | Os05g0332300 | - | Detail |
| CX5g038494 | 5:13,026,048-13,026,968 | - | - | C2H5g15153 | - | - | - | Detail |
| CX5g038516 | 5:13,035,904-13,037,418 | - | C1H5g16392 | - | LOC_Os05g26840 | Os05g0332600 | - | Detail |
| CX5g036735 | 5:13,057,603-13,058,193 | - | - | - | - | Os05g0333600 | - | Detail |
| CX5g039489 | 5:13,061,827-13,062,296 | - | C1H5g25969 | - | - | - | - | Detail |
| CX5g040823 | 5:13,063,572-13,067,246 | - | C1H5g03022 | C2H5g12100 | LOC_Os05g26890 | Os05g0333200 | D1, RGA1 | Detail |
| CX5g037095 | 5:13,068,698-13,069,174 | + | - | - | - | - | - | Detail |