| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23607 | 3:16,137,145-16,137,691 | + | C1H3g03549 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g24777 | 3:16,139,530-16,139,857 | - | C1H3g06307 | CX3g028435 | LOC_Os02g58170 | Os03g0563400 | - | Detail |
| C2H3g29625 | 3:16,142,020-16,143,062 | + | C1H3g03536 | - | - | - | - | Detail |
| C2H3g29941 | 3:16,143,940-16,145,359 | + | C1H3g15507 | CX9g057750 | LOC_Os03g31090 | Os03g0424500 | - | Detail |
| C2H3g02070 | 3:16,148,792-16,152,137 | + | C1H3g06288 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g13373 | 3:16,152,706-16,155,867 | - | C1H3g23569 | CX3g026358 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| C2H3g29562 | 3:16,167,058-16,172,876 | + | C1H3g07104 | CX3g025115 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| C2H3g24938 | 3:16,178,346-16,180,250 | + | C1H3g07332 | CX3g030946 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| C2H3g12524 | 3:16,198,271-16,201,931 | + | C1H3g20426 | CX3g025387 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| C2H3g01389 | 3:16,219,189-16,223,952 | - | C1H3g22127 | CX3g029401 | LOC_Os03g31260 | Os03g0426300 | - | Detail |
| C2H3g18833 | 3:16,239,408-16,239,608 | + | C1H3g16780 | CX3g025661 | LOC_Os03g31290 | Os03g0426800 | - | Detail |
| C2H3g26583 | 3:16,247,699-16,254,421 | + | C1H3g17321 | CX3g031265 | LOC_Os03g31300 | Os03g0426900 | - | Detail |
| C2H3g22373 | 3:16,281,252-16,282,125 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g09016 | 3:16,282,166-16,282,937 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g13790 | 3:16,285,724-16,292,834 | + | C1H3g10283 | CX3g031010 | LOC_Os03g31400 | Os03g0427900 | - | Detail |
| C2H3g14816 | 3:16,293,880-16,297,409 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0347900 | - | Detail |
| C2H3g18509 | 3:16,297,518-16,298,891 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0428200 | - | Detail |
| C2H3g21714 | 3:16,305,845-16,307,476 | - | C1H3g31158 | - | - | Os03g0428200 | - | Detail |
| C2H3g17080 | 3:16,311,662-16,314,940 | - | C1H8g17324 | - | LOC_Os03g04150 | - | - | Detail |
| C2H3g05528 | 3:16,362,675-16,365,594 | + | C1H3g02780 | CX3g027331 | LOC_Os03g31490 | Os03g0428800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |