| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02389 | 1:5,064,132-5,067,575 | + | C1H1g24281 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C2H1g00620 | 1:5,072,968-5,076,457 | + | C1H1g05818 | - | - | - | - | Detail |
| C2H1g06707 | 1:5,077,033-5,077,365 | - | - | CX1g003988 | LOC_Os01g10760 | - | - | Detail |
| C2H1g06825 | 1:5,081,441-5,085,113 | + | C1H1g15430 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C2H1g29778 | 1:5,085,647-5,088,895 | - | C1H1g01247 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C2H1g24453 | 1:5,089,258-5,090,173 | + | C1H1g30346 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| C2H1g13509 | 1:5,090,729-5,093,048 | + | C1H1g10011 | CX1g000819 | LOC_Os01g10820 | Os01g0205500 | - | Detail |
| C2H1g12859 | 1:5,093,967-5,094,710 | + | - | CX1g000204 | LOC_Os01g10830 | Os01g0205600 | - | Detail |
| C2H1g23870 | 1:5,094,888-5,099,129 | - | C1H1g14161 | CX1g005006 | LOC_Os01g10840 | Os01g0205700 | OsGSK1 | Detail |
| C2H1g26064 | 1:5,109,784-5,111,337 | + | C1H1g29186 | CX1g004213 | LOC_Os01g10850 | Os01g0205900 | - | Detail |
| C2H1g07122 | 1:5,116,012-5,118,520 | - | C1H1g14349 | CX1g004112 | LOC_Os01g10860 | Os01g0206200 | - | Detail |
| C2H1g16332 | 1:5,120,411-5,121,958 | + | C1H1g03820 | CX1g005441 | LOC_Os01g10870 | Os01g0206300 | - | Detail |
| C2H1g26046 | 1:5,125,559-5,125,866 | + | C1H1g26102 | CX1g000067 | LOC_Os01g10880 | Os01g0206600 | - | Detail |
| C2H1g04173 | 1:5,127,327-5,128,712 | - | C1H1g18869 | CX1g006125 | LOC_Os01g10890 | Os01g0206700 | - | Detail |
| C2H1g21997 | 1:5,132,736-5,136,371 | - | C1H1g13675 | CX1g006766 | LOC_Os01g10900 | Os01g0206800 | - | Detail |
| C2H1g22901 | 1:5,136,207-5,136,641 | + | C1H1g27430 | - | - | Os01g0207001 | - | Detail |
| C2H1g18153 | 1:5,141,845-5,143,644 | - | C1H1g29711 | CX1g005481 | LOC_Os01g10920 | Os01g0207200 | - | Detail |
| C2H1g15053 | 1:5,144,297-5,146,141 | - | C1H1g26757 | CX1g005600 | LOC_Os01g10930 | Os01g0207200 | - | Detail |
| C2H1g24427 | 1:5,149,952-5,151,694 | - | C1H1g01947 | CX1g003080 | LOC_Os01g10950 | Os01g0207400 | - | Detail |
| C2H1g00526 | 1:5,153,817-5,155,649 | - | C1H1g01947 | CX1g002931 | LOC_Os01g10960 | Os01g0207600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |