| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g06886 | 6:16,727,624-16,728,553 | - | C1H6g09449 | CX6g041753 | LOC_Os06g32910 | Os06g0520733 | - | Detail |
| C2H6g19136 | 6:16,749,518-16,750,569 | + | C1H6g11545 | CX6g042633 | LOC_Os06g32960 | Os06g0521400 | - | Detail |
| C2H6g01968 | 6:16,753,511-16,754,597 | - | C1H6g21195 | CX6g042633 | LOC_Os06g32980 | Os06g0521400 | - | Detail |
| C2H6g01283 | 6:16,767,249-16,768,415 | - | C1H6g30243 | CX6g042633 | LOC_Os06g32990 | Os06g0521500 | - | Detail |
| C2H6g06367 | 6:16,782,979-16,784,088 | - | C1H6g20726 | CX6g042633 | LOC_Os06g33080 | Os06g0522100 | - | Detail |
| C2H6g19763 | 6:16,794,792-16,795,902 | - | C1H6g20821 | CX6g042633 | LOC_Os06g33080 | Os06g0522100 | - | Detail |
| C2H6g16352 | 6:16,806,767-16,807,863 | - | C1H6g29917 | CX6g042633 | LOC_Os06g33100 | Os06g0522100 | - | Detail |
| C2H6g09426 | 6:16,827,776-16,828,198 | + | C1H6g21433 | CX6g045503 | LOC_Os06g33130 | - | - | Detail |
| C2H6g09034 | 6:16,845,922-16,849,259 | + | C1H6g11526 | - | - | - | - | Detail |
| C2H6g05346 | 6:16,868,701-16,873,657 | - | C1H6g13325 | CX6g045838 | LOC_Os06g33210 | Os06g0523400 | - | Detail |
| C2H6g30031 | 6:16,915,430-16,918,877 | + | C1H6g02067 | CX6g043726 | LOC_Os06g33250 | Os06g0523900 | - | Detail |
| C2H6g05593 | 6:16,934,838-16,940,909 | + | C1H6g05613 | CX6g044960 | LOC_Os06g33320 | Os06g0524300 | - | Detail |
| C2H6g01128 | 6:16,950,618-16,953,277 | + | C1H6g17546 | CX6g042169 | LOC_Os06g33330 | Os06g0524400 | - | Detail |
| C2H6g15987 | 6:16,962,706-16,964,919 | - | C1H6g15247 | CX6g044488 | LOC_Os06g33350 | Os06g0524700 | - | Detail |
| C2H6g22475 | 6:17,007,368-17,009,703 | + | C1H6g26812 | CX6g041941 | LOC_Os06g33360 | Os06g0524900 | - | Detail |
| C2H6g19720 | 6:17,014,376-17,018,379 | - | C1H6g26740 | CX6g042218 | LOC_Os06g33340 | Os06g0525000 | - | Detail |
| C2H6g10591 | 6:17,049,203-17,053,126 | + | C1H6g11127 | CX6g041250 | LOC_Os06g33450 | Os06g0526100 | OsSPCH1 | Detail |
| C2H6g09722 | 6:17,066,246-17,069,251 | - | - | - | - | Os06g0526350 | - | Detail |
| C2H6g25956 | 6:17,079,319-17,082,518 | - | C1H6g01850 | CX6g041558 | LOC_Os06g33480 | Os06g0526400 | - | Detail |
| C2H6g14289 | 6:17,084,819-17,087,382 | - | C1H6g24388 | CX6g041995 | LOC_Os06g33490 | Os06g0526466 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |