| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24238 | 4:25,628,816-25,629,641 | - | C2H4g27086 | - | - | - | - | Detail |
| C1H4g00268 | 4:25,639,643-25,640,314 | - | C2H4g21376 | CX4g031720 | LOC_Os04g49370 | Os04g0583200 | - | Detail |
| C1H4g05377 | 4:25,646,411-25,649,591 | + | C2H4g06128 | CX4g035915 | LOC_Os04g49410 | Os04g0583500 | - | Detail |
| C1H4g10611 | 4:25,658,527-25,664,246 | + | C2H4g03384 | CX4g033604 | LOC_Os04g49430 | Os04g0583700 | - | Detail |
| C1H4g25778 | 4:25,664,394-25,665,258 | + | C2H4g01268 | CX4g035620 | LOC_Os04g49440 | Os04g0583800 | - | Detail |
| C1H4g02637 | 4:25,666,267-25,668,473 | - | C2H4g28246 | CX4g032810 | LOC_Os04g49450 | Os04g0583900 | OsMYBR1 | Detail |
| C1H4g19370 | 4:25,672,798-25,678,803 | - | C2H4g25417 | CX4g033055 | LOC_Os04g49480 | Os04g0584100 | - | Detail |
| C1H4g21934 | 4:25,679,481-25,681,903 | - | C2H4g23268 | CX4g034658 | LOC_Os04g49490 | Os04g0584300 | - | Detail |
| C1H4g16992 | 4:25,686,061-25,687,748 | + | C2H4g28486 | CX4g033783 | LOC_Os04g49500 | Os04g0584500 | - | Detail |
| C1H4g28792 | 4:25,689,795-25,690,771 | + | - | CX4g033783 | - | - | - | Detail |
| C1H4g24874 | 4:25,696,349-25,701,110 | + | C2H4g17908 | CX4g033315 | LOC_Os04g49510 | Os04g0584600 | - | Detail |
| C1H4g08643 | 4:25,704,116-25,706,969 | + | C2H4g09139 | CX4g033560 | LOC_Os04g49530 | Os04g0584800 | - | Detail |
| C1H4g15954 | 4:25,707,294-25,709,859 | - | C2H4g09773 | CX4g034212 | LOC_Os04g49540 | Os04g0584900 | - | Detail |
| C1H4g04008 | 4:25,721,700-25,728,251 | - | C2H4g30371 | CX4g033323 | LOC_Os04g49560 | Os04g0585100 | - | Detail |
| C1H4g02770 | 4:25,731,050-25,735,734 | - | C2H4g20709 | CX4g035018 | LOC_Os04g49570 | Os04g0585200 | OsGLR4.1 | Detail |
| C1H4g07246 | 4:25,737,275-25,742,931 | - | C2H4g02580 | CX4g035353 | LOC_Os04g49580 | Os04g0585300 | - | Detail |
| C1H4g19488 | 4:25,743,865-25,746,298 | - | C2H4g10022 | CX4g035330 | LOC_Os04g49590 | Os04g0585400 | - | Detail |
| C1H4g16820 | 4:25,747,113-25,748,905 | - | C2H4g11776 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C1H4g09246 | 4:25,753,094-25,754,709 | - | C2H4g11266 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C1H4g23552 | 4:25,764,445-25,765,425 | + | C2H4g23175 | CX4g033332 | LOC_Os04g52560 | Os04g0421700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |