| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01756 | 1:28,442,600-28,446,459 | - | C2H1g24899 | CX1g006495 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| C1H1g09106 | 1:28,446,569-28,452,312 | + | C2H1g22215 | CX1g003762 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| C1H1g06019 | 1:28,452,372-28,455,507 | - | C2H1g22679 | CX1g005426 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| C1H1g04207 | 1:28,456,779-28,457,455 | - | C2H1g13025 | CX1g002989 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| C1H1g13262 | 1:28,475,780-28,481,777 | - | C2H1g30086 | CX1g006023 | LOC_Os01g55350 | Os01g0758300 | - | Detail |
| C1H1g12904 | 1:28,485,956-28,492,565 | - | - | CX1g005462 | LOC_Os01g55360 | Os01g0758400 | - | Detail |
| C1H1g00696 | 1:28,532,302-28,535,274 | + | C2H1g29396 | CX1g004565 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| C1H1g24935 | 1:28,541,133-28,542,031 | + | C2H1g14233 | CX1g005946 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| C1H1g27055 | 1:28,543,419-28,545,114 | - | C2H1g23330 | CX1g002012 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| C1H1g18342 | 1:28,548,617-28,549,510 | + | C2H1g17948 | CX1g006544 | - | Os01g0159000 | OsDOG1L-1 | Detail |
| C1H1g03820 | 1:28,559,017-28,564,067 | - | C2H1g19008 | CX1g003443 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| C1H1g27932 | 1:28,572,214-28,576,644 | + | C2H1g00211 | CX1g002187 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| C1H1g25715 | 1:28,578,957-28,583,119 | + | C2H1g11945 | CX1g003122 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| C1H1g21149 | 1:28,585,520-28,585,988 | + | C2H1g06818 | CX1g003072 | LOC_Os01g55510 | Os01g0760000 | - | Detail |
| C1H1g05508 | 1:28,588,889-28,589,116 | + | C2H1g24110 | CX1g005270 | LOC_Os01g55520 | Os01g0760300 | OsRopGEF8 | Detail |
| C1H1g04922 | 1:28,589,192-28,591,015 | + | C2H1g24110 | CX1g005270 | LOC_Os01g55520 | Os01g0760300 | OsRopGEF8 | Detail |
| C1H1g22131 | 1:28,593,747-28,596,755 | - | C2H1g28840 | CX1g005505 | LOC_Os01g55530 | Os01g0760400 | - | Detail |
| C1H1g24669 | 1:28,600,231-28,605,269 | - | C2H1g30012 | CX1g003690 | LOC_Os01g55540 | Os01g0760600 | - | Detail |
| C1H1g26811 | 1:28,606,876-28,610,271 | - | C2H1g07156 | CX1g007126 | LOC_Os01g55549 | Os01g0760800 | OsGL2 | Detail |
| C1H1g11405 | 1:28,611,903-28,613,961 | - | C2H1g22947 | CX1g001192 | LOC_Os01g55560 | Os01g0760900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |