| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g12965 | 6:24,182,047-24,182,463 | - | C2H6g06613 | CX6g043496 | LOC_Os06g45950 | Os06g0671150 | - | Detail |
| C1H6g05593 | 6:24,195,543-24,198,818 | - | C2H6g23053 | CX6g043201 | LOC_Os06g45960 | Os06g0671300 | - | Detail |
| C1H6g13886 | 6:24,213,709-24,214,158 | + | C2H6g06613 | CX6g045889 | LOC_Os06g45970 | Os06g0671600 | - | Detail |
| C1H6g19408 | 6:24,218,975-24,226,634 | + | C2H6g22756 | CX6g041235 | LOC_Os06g45980 | Os06g0671700 | - | Detail |
| C1H6g17945 | 6:24,227,620-24,229,468 | + | C2H6g13643 | CX6g042168 | LOC_Os06g45990 | Os06g0671800 | OsSec14-18 | Detail |
| C1H6g20129 | 6:24,230,174-24,232,712 | - | C2H6g13523 | CX6g043235 | LOC_Os06g46000 | Os06g0671900 | - | Detail |
| C1H6g04835 | 6:24,256,370-24,257,188 | - | C2H6g03424 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C1H6g03300 | 6:24,270,337-24,270,881 | - | - | - | - | - | - | Detail |
| C1H6g06589 | 6:24,274,689-24,275,003 | - | C2H6g07492 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C1H6g00429 | 6:24,277,861-24,279,269 | - | C2H6g20505 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g04560 | 6:24,279,912-24,281,438 | - | C2H6g16269 | CX6g044377 | LOC_Os06g46060 | Os06g0672700 | - | Detail |
| C1H6g09876 | 6:24,288,922-24,290,989 | - | C2H6g04402 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C1H6g27031 | 6:24,306,103-24,308,411 | - | C2H6g20505 | CX6g044377 | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g15594 | 6:24,318,389-24,325,882 | - | - | - | - | - | - | Detail |
| C1H6g15821 | 6:24,332,761-24,333,111 | - | - | CX6g042451 | LOC_Os06g46140 | Os06g0673800 | - | Detail |
| C1H6g14950 | 6:24,337,188-24,339,185 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g06204 | 6:24,362,397-24,364,590 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g18354 | 6:24,387,346-24,388,516 | - | - | - | - | - | - | Detail |
| C1H6g03179 | 6:24,394,081-24,398,585 | + | C2H6g00947 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C1H6g26263 | 6:24,404,228-24,405,469 | - | - | CX6g043181 | LOC_Os06g46250 | Os06g0675200 | LIN1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040297 | 5:12,599,040-12,599,480 | - | - | C2H5g13058 | - | - | - | Detail |
| CX5g040054 | 5:12,606,382-12,606,594 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g037076 | 5:12,620,570-12,620,752 | - | - | - | - | - | - | Detail |
| CX5g039910 | 5:12,622,841-12,623,344 | - | - | - | LOC_Os07g30270 | Os05g0391300 | - | Detail |
| CX5g039065 | 5:12,629,722-12,634,184 | + | C1H5g21190 | C2H5g30247 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| CX5g039731 | 5:12,649,645-12,650,805 | + | C1H5g09562 | C2H5g20457 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| CX5g037483 | 5:12,656,887-12,659,452 | + | C1H5g20684 | C2H5g00966 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| CX5g038834 | 5:12,665,584-12,665,853 | - | - | - | - | - | - | Detail |
| CX5g040463 | 5:12,666,504-12,666,689 | - | - | C2H5g05199 | - | - | - | Detail |
| CX5g037550 | 5:12,666,717-12,668,907 | - | C1H5g15138 | C2H5g12832 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| CX5g037938 | 5:12,674,815-12,680,741 | - | C1H5g02171 | C2H5g23193 | LOC_Os05g25810 | Os05g0475600 | - | Detail |
| CX5g038231 | 5:12,690,444-12,694,095 | + | C1H5g07569 | C2H5g25840 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| CX5g039355 | 5:12,695,399-12,699,616 | + | C1H5g09336 | C2H5g02562 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| CX5g038450 | 5:12,701,365-12,702,795 | + | C1H5g18365 | C2H5g29319 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g038330 | 5:12,738,054-12,739,730 | + | C1H5g19700 | C2H5g22294 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| CX5g040251 | 5:12,740,482-12,743,532 | - | C1H5g26142 | C2H5g05113 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| CX5g040589 | 5:12,743,682-12,744,035 | + | - | - | - | - | - | Detail |
| CX5g041147 | 5:12,747,258-12,749,219 | + | C1H5g26115 | C2H5g07422 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| CX5g037562 | 5:12,750,610-12,750,948 | - | - | - | - | - | - | Detail |
| CX5g037321 | 5:12,752,169-12,752,960 | - | C1H5g11519 | C2H5g25197 | LOC_Os05g25910 | Os05g0324600 | OsOFP19 | Detail |