| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21952 | 3:2,706,336-2,707,098 | + | - | - | LOC_Os03g06250 | Os03g0158600 | - | Detail |
| C2H3g18282 | 3:2,710,130-2,714,536 | - | C1H3g08402 | CX3g030115 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g21729 | 3:2,714,937-2,716,403 | + | C1H3g27159 | CX3g028779 | LOC_Os03g13230 | Os03g0158900 | - | Detail |
| C2H3g27396 | 3:2,716,574-2,719,895 | - | C1H3g28868 | CX3g025128 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g05214 | 3:2,723,208-2,726,317 | + | C1H3g19166 | CX3g026196 | LOC_Os03g06330 | Os03g0159100 | - | Detail |
| C2H3g05736 | 3:2,728,005-2,734,714 | + | C1H3g00562 | CX3g029258 | LOC_Os03g06340 | Os03g0159200 | - | Detail |
| C2H3g02146 | 3:2,736,955-2,737,632 | - | C1H3g03543 | CX3g031270 | LOC_Os03g06350 | Os03g0159400 | - | Detail |
| C2H3g07500 | 3:2,742,445-2,743,445 | - | C1H3g19003 | CX3g027894 | LOC_Os03g06360 | Os03g0159600 | - | Detail |
| C2H3g25960 | 3:2,744,050-2,745,670 | + | C1H3g22077 | CX3g031117 | LOC_Os03g06370 | Os03g0159700 | OsNBL3 | Detail |
| C2H3g24140 | 3:2,749,659-2,750,132 | - | C1H3g26257 | CX3g025627 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| C2H3g08821 | 3:2,754,362-2,761,304 | + | C1H3g14921 | CX3g025658 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| C2H3g02952 | 3:2,761,840-2,764,637 | + | C1H3g04551 | - | - | - | - | Detail |
| C2H3g01208 | 3:2,765,754-2,766,050 | - | C1H3g16143 | CX3g027015 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| C2H3g27894 | 3:2,768,854-2,773,180 | - | C1H3g24862 | CX3g030159 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| C2H3g10921 | 3:2,782,383-2,785,427 | - | C1H3g27076 | CX3g027024 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| C2H3g17145 | 3:2,795,605-2,796,258 | - | C1H3g12946 | CX3g031001 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| C2H3g18147 | 3:2,804,232-2,804,662 | + | C1H3g01001 | - | LOC_Os03g06490 | Os03g0161000 | - | Detail |
| C2H3g23882 | 3:2,804,963-2,805,248 | + | C1H3g27407 | CX3g025715 | - | - | - | Detail |
| C2H3g19291 | 3:2,807,664-2,808,054 | + | C1H3g20415 | CX3g025715 | - | - | - | Detail |
| C2H3g21331 | 3:2,811,186-2,812,513 | + | C1H3g11018 | - | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038046 | 5:12,300,320-12,300,523 | - | - | - | - | - | - | Detail |
| CX5g039976 | 5:12,306,625-12,310,781 | + | C1H5g14900 | C2H5g23035 | LOC_Os05g25390 | Os05g0318100 | - | Detail |
| CX5g038674 | 5:12,314,270-12,314,629 | - | - | - | - | - | - | Detail |
| CX5g039796 | 5:12,412,026-12,412,241 | - | - | C2H6g18534 | LOC_Os08g11640 | - | - | Detail |
| CX5g037048 | 5:12,450,955-12,451,921 | - | - | - | LOC_Os05g24500 | - | - | Detail |
| CX5g040068 | 5:12,457,537-12,457,701 | - | - | - | - | - | - | Detail |
| CX5g040081 | 5:12,464,445-12,464,810 | - | - | - | - | - | - | Detail |
| CX5g038027 | 5:12,479,638-12,482,093 | - | C1H5g15470 | C2H5g07200 | LOC_Os05g25430 | Os05g0318600 | - | Detail |
| CX5g040228 | 5:12,489,218-12,491,797 | - | C1H5g07927 | C2H5g03787 | LOC_Os05g25450 | Os05g0318700 | - | Detail |
| CX5g039400 | 5:12,505,938-12,506,198 | + | - | - | - | - | - | Detail |
| CX5g040187 | 5:12,509,829-12,512,163 | + | C1H5g17811 | C2H5g10029 | LOC_Os05g25480 | Os05g0319100 | - | Detail |
| CX5g037138 | 5:12,515,842-12,518,524 | - | C1H5g31568 | C2H5g07167 | LOC_Os05g25490 | Os05g0319200 | - | Detail |
| CX5g039469 | 5:12,531,557-12,534,648 | + | C1H5g04131 | C2H5g12461 | LOC_Os05g25540 | Os05g0319700 | - | Detail |
| CX5g039975 | 5:12,542,842-12,546,859 | - | C1H5g06844 | C2H5g02040 | LOC_Os05g25550 | Os05g0319800 | - | Detail |
| CX5g037533 | 5:12,548,411-12,550,106 | - | C1H5g00809 | C2H5g18962 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| CX5g040698 | 5:12,559,395-12,560,638 | - | - | C2H10g24804 | LOC_Os05g25580 | Os05g0320100 | - | Detail |
| CX5g040926 | 5:12,568,423-12,568,938 | + | C1H5g07771 | C2H5g16379 | LOC_Os05g25600 | - | - | Detail |
| CX5g040614 | 5:12,571,762-12,572,623 | + | C1H5g18434 | C2H5g17208 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| CX5g040663 | 5:12,579,401-12,583,074 | - | C1H5g29408 | C2H5g12884 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| CX5g037927 | 5:12,596,368-12,596,604 | + | C1H5g10767 | C2H5g15346 | LOC_Os01g12020 | Os05g0477900 | - | Detail |