| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g29942 | 12:4,589,116-4,591,397 | + | C2H12g21993 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C1H12g23734 | 12:4,616,353-4,617,361 | - | C2H12g02513 | CX12g017268 | LOC_Os06g23340 | - | - | Detail |
| C1H12g26851 | 12:4,631,079-4,631,492 | - | C2H12g06069 | - | - | - | - | Detail |
| C1H12g08099 | 12:4,745,315-4,746,856 | + | C2H12g23156 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C1H12g25986 | 12:4,747,716-4,748,767 | + | C2H12g10521 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C1H12g24838 | 12:4,749,335-4,755,507 | - | C2H12g28534 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C1H12g13815 | 12:4,756,959-4,759,016 | + | C2H12g14596 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C1H12g15070 | 12:4,760,024-4,763,412 | + | C2H12g19800 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C1H12g07643 | 12:4,764,423-4,766,881 | - | C2H12g26432 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C1H12g30565 | 12:4,771,200-4,773,285 | + | C2H12g29948 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C1H12g14694 | 12:4,800,328-4,800,810 | + | C2H12g27282 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C1H12g14346 | 12:4,801,775-4,806,705 | + | C2H12g03169 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C1H12g25521 | 12:4,811,369-4,814,332 | + | C2H12g06639 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C1H12g12793 | 12:4,836,735-4,838,639 | - | C2H12g05093 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| C1H12g14579 | 12:4,842,518-4,844,473 | + | C2H12g02344 | CX12g015919 | LOC_Os12g10340 | Os12g0204800 | - | Detail |
| C1H12g02564 | 12:4,853,068-4,853,491 | - | C2H12g25946 | CX12g015129 | LOC_Os12g10360 | Os12g0204600 | - | Detail |
| C1H12g25059 | 12:4,855,166-4,855,744 | + | C2H12g14824 | - | LOC_Os12g10320 | Os12g0204500 | - | Detail |
| C1H12g01099 | 12:4,869,875-4,871,776 | - | C2H12g20127 | CX12g016073 | LOC_Os12g10390 | Os12g0204600 | - | Detail |
| C1H12g29266 | 12:4,880,354-4,886,434 | - | C2H12g17911 | CX12g018520 | LOC_Os12g10410 | Os12g0205500 | - | Detail |
| C1H12g30583 | 12:4,925,406-4,927,756 | - | C2H12g21157 | CX12g017375 | LOC_Os12g10520 | Os12g0206800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037484 | 5:11,853,530-11,855,359 | - | C1H5g04494 | C2H5g17111 | LOC_Os05g24560 | Os05g0310600 | - | Detail |
| CX5g038686 | 5:11,858,740-11,859,357 | - | - | - | LOC_Os05g24570 | - | - | Detail |
| CX5g040547 | 5:11,861,887-11,869,526 | + | C1H5g26249 | C2H5g23044 | LOC_Os05g24580 | Os05g0310750 | - | Detail |
| CX5g040019 | 5:11,873,379-11,877,507 | + | C1H5g13473 | C2H5g15821 | LOC_Os05g24601 | Os05g0310800 | - | Detail |
| CX5g037996 | 5:11,881,892-11,887,866 | + | C1H5g24769 | C2H5g25624 | LOC_Os05g24601 | Os05g0311000 | - | Detail |
| CX5g038390 | 5:11,902,164-11,902,760 | + | - | C2H10g11516 | - | - | - | Detail |
| CX5g040254 | 5:11,908,375-11,908,527 | - | - | - | - | - | - | Detail |
| CX5g036740 | 5:11,917,760-11,921,445 | - | - | C2H5g11879 | LOC_Os05g25170 | - | - | Detail |
| CX5g037701 | 5:11,928,639-11,929,399 | + | C1H5g28483 | C2H5g00350 | LOC_Os05g24650 | Os05g0311500 | - | Detail |
| CX5g041079 | 5:11,941,754-11,942,791 | - | C1H5g04420 | C2H5g30187 | LOC_Os05g24660 | Os05g0311801 | - | Detail |
| CX5g040887 | 5:11,960,285-11,972,948 | - | C1H5g19973 | C2H5g01545 | LOC_Os05g24684 | Os05g0312000 | SPL40 | Detail |
| CX5g038506 | 5:11,986,585-11,987,294 | + | - | - | LOC_Os05g25600 | - | - | Detail |
| CX5g039273 | 5:11,993,593-11,994,240 | + | C1H5g11883 | C2H5g02533 | LOC_Os05g24760 | Os05g0482501 | - | Detail |
| CX5g037289 | 5:11,994,870-11,997,408 | - | C1H5g11619 | C2H5g12302 | LOC_Os05g24770 | Os05g0312500 | - | Detail |
| CX5g037428 | 5:11,999,410-12,000,141 | + | - | - | - | - | - | Detail |
| CX5g039271 | 5:12,018,614-12,024,254 | + | C1H5g25693 | C2H5g00579 | LOC_Os05g24880 | Os05g0313500 | - | Detail |
| CX5g039346 | 5:12,025,500-12,026,941 | + | C1H5g14999 | C2H5g28956 | LOC_Os05g24890 | Os05g0313600 | - | Detail |
| CX5g038570 | 5:12,028,050-12,029,834 | - | C1H5g19700 | C2H5g27404 | LOC_Os05g24900 | Os05g0313700 | - | Detail |
| CX5g040897 | 5:12,034,750-12,035,238 | - | C1H5g14342 | C2H5g08606 | - | Os05g0313900 | - | Detail |
| CX5g038966 | 5:12,035,253-12,039,271 | - | C1H5g14342 | C2H5g09680 | LOC_Os05g24930 | Os05g0583950 | - | Detail |