| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003944 | 1:22,304,369-22,306,871 | - | C1H1g16638 | C2H1g23165 | LOC_Os01g43350 | Os01g0621600 | - | Detail |
| CX1g004083 | 1:22,314,073-22,316,080 | + | C1H1g27348 | C2H1g10395 | LOC_Os01g43360 | Os01g0621700 | - | Detail |
| CX1g001289 | 1:22,320,499-22,321,553 | - | C1H1g30367 | - | - | - | - | Detail |
| CX1g003634 | 1:22,335,144-22,336,379 | + | - | C2H1g26417 | LOC_Os01g43370 | Os01g0621900 | - | Detail |
| CX1g004618 | 1:22,337,199-22,343,768 | - | C1H1g19725 | C2H1g25582 | LOC_Os01g43380 | Os01g0622000 | OsCUGT1 | Detail |
| CX1g000056 | 1:22,348,644-22,352,447 | - | C1H1g08672 | C2H1g15176 | LOC_Os01g43390 | Os01g0622300 | - | Detail |
| CX1g001492 | 1:22,355,305-22,355,871 | + | - | - | - | Os01g0622500 | - | Detail |
| CX1g001074 | 1:22,361,997-22,365,570 | + | C1H1g22865 | C2H1g30156 | LOC_Os01g43410 | Os01g0622600 | OsCDPK1 | Detail |
| CX1g000635 | 1:22,366,539-22,368,883 | - | C1H1g18789 | C2H1g02104 | LOC_Os01g43420 | Os01g0622700 | - | Detail |
| CX1g001691 | 1:22,372,651-22,373,186 | - | - | - | - | - | - | Detail |
| CX1g003786 | 1:22,377,101-22,378,582 | - | C1H1g29168 | C2H1g11647 | LOC_Os01g43440 | Os01g0623000 | - | Detail |
| CX1g004629 | 1:22,386,539-22,388,896 | - | C1H1g20868 | C2H1g10689 | LOC_Os01g43460 | Os01g0623200 | - | Detail |
| CX1g005517 | 1:22,396,986-22,397,168 | + | - | - | - | - | - | Detail |
| CX1g006073 | 1:22,398,839-22,399,006 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g003092 | 1:22,406,699-22,406,890 | + | - | - | - | - | - | Detail |
| CX1g000368 | 1:22,416,381-22,422,004 | + | C1H1g24955 | C2H1g01444 | LOC_Os01g43480 | Os01g0623500 | - | Detail |
| CX1g004281 | 1:22,422,353-22,423,736 | - | C1H1g04827 | C2H1g06403 | LOC_Os01g43490 | Os01g0623600 | - | Detail |
| CX1g006896 | 1:22,437,451-22,447,496 | - | C1H1g31514 | C2H1g29376 | LOC_Os01g43520 | Os01g0624000 | - | Detail |
| CX1g006589 | 1:22,461,370-22,465,965 | + | C1H1g00190 | C2H1g28317 | LOC_Os01g43540 | Os01g0624500 | OsSGT1 | Detail |
| CX1g001039 | 1:22,469,001-22,470,629 | - | C1H1g11259 | C2H1g27058 | LOC_Os01g43550 | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |