| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g22521 | 7:20,927,598-20,929,277 | + | C2H7g23102 | CX7g047968 | LOC_Os07g41240 | Os07g0603700 | GE1, ge1, ge, CYP78A13, OsCYP78A13, GE, BG2 | Detail |
| C1H7g18114 | 7:20,933,162-20,936,565 | + | C2H7g24085 | CX7g047799 | LOC_Os07g41250 | Os07g0603800 | OsNPF7.1a, OsNPF7.1 | Detail |
| C1H7g27139 | 7:20,937,377-20,943,411 | + | C2H7g27266 | CX7g046521 | LOC_Os07g41260 | Os07g0603900 | - | Detail |
| C1H7g22892 | 7:20,945,402-20,950,594 | + | C2H7g11752 | CX7g047916 | LOC_Os07g41280 | Os07g0604000 | - | Detail |
| C1H7g01109 | 7:20,954,082-20,954,523 | + | C2H7g10698 | - | LOC_Os07g41290 | Os07g0604100 | - | Detail |
| C1H7g15311 | 7:20,960,472-20,963,651 | + | C2H7g19715 | CX7g050327 | LOC_Os07g41310 | Os07g0604300 | OsBC1L6 | Detail |
| C1H7g09407 | 7:20,964,185-20,967,260 | - | C2H7g04451 | CX7g048924 | LOC_Os07g41320 | Os07g0604400 | - | Detail |
| C1H7g14121 | 7:20,970,874-20,971,398 | - | C2H7g30044 | CX7g047325 | LOC_Os07g41330 | Os07g0604550 | - | Detail |
| C1H7g30183 | 7:20,971,779-20,972,450 | - | C2H7g30044 | CX7g050196 | LOC_Os07g41330 | Os07g0604500 | - | Detail |
| C1H7g26293 | 7:20,974,692-20,975,541 | + | C2H7g28680 | - | LOC_Os07g41340 | Os07g0604600 | - | Detail |
| C1H7g13277 | 7:20,977,703-20,978,330 | + | C2H7g05768 | - | LOC_Os07g41350 | Os07g0604700 | OsB12D1 | Detail |
| C1H7g04285 | 7:20,983,322-20,986,593 | + | C2H7g30253 | CX7g046180 | LOC_Os07g41360 | Os07g0604800 | UAM3, OsUAM3 | Detail |
| C1H7g19964 | 7:20,998,397-21,005,744 | + | C2H7g00539 | CX7g048061 | LOC_Os07g41370 | Os07g0605200 | MADS18, OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28 | Detail |
| C1H7g17497 | 7:21,007,308-21,007,836 | + | C2H7g17393 | CX7g050225 | - | Os07g0605275 | - | Detail |
| C1H7g11179 | 7:21,010,935-21,011,156 | + | C2H7g17393 | CX7g050225 | LOC_Os07g41400 | Os07g0605350 | - | Detail |
| C1H7g29119 | 7:21,011,404-21,011,891 | + | C2H7g14198 | - | - | - | - | Detail |
| C1H7g10268 | 7:21,013,786-21,014,262 | + | C2H7g17393 | CX7g047433 | LOC_Os07g41410 | Os07g0605400 | - | Detail |
| C1H7g18805 | 7:21,038,133-21,039,173 | - | C2H7g17255 | CX7g047919 | LOC_Os07g41460 | Os07g0605800 | - | Detail |
| C1H7g26886 | 7:21,045,223-21,053,317 | + | C2H7g18823 | CX7g048068 | LOC_Os07g41570 | Os07g0606500 | - | Detail |
| C1H7g06861 | 7:21,059,528-21,060,205 | - | C2H7g12438 | - | LOC_Os07g41580 | Os07g0606600 | OsNF-YB10, HAP3F | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003944 | 1:22,304,369-22,306,871 | - | C1H1g16638 | C2H1g23165 | LOC_Os01g43350 | Os01g0621600 | - | Detail |
| CX1g004083 | 1:22,314,073-22,316,080 | + | C1H1g27348 | C2H1g10395 | LOC_Os01g43360 | Os01g0621700 | - | Detail |
| CX1g001289 | 1:22,320,499-22,321,553 | - | C1H1g30367 | - | - | - | - | Detail |
| CX1g003634 | 1:22,335,144-22,336,379 | + | - | C2H1g26417 | LOC_Os01g43370 | Os01g0621900 | - | Detail |
| CX1g004618 | 1:22,337,199-22,343,768 | - | C1H1g19725 | C2H1g25582 | LOC_Os01g43380 | Os01g0622000 | OsCUGT1 | Detail |
| CX1g000056 | 1:22,348,644-22,352,447 | - | C1H1g08672 | C2H1g15176 | LOC_Os01g43390 | Os01g0622300 | - | Detail |
| CX1g001492 | 1:22,355,305-22,355,871 | + | - | - | - | Os01g0622500 | - | Detail |
| CX1g001074 | 1:22,361,997-22,365,570 | + | C1H1g22865 | C2H1g30156 | LOC_Os01g43410 | Os01g0622600 | OsCDPK1 | Detail |
| CX1g000635 | 1:22,366,539-22,368,883 | - | C1H1g18789 | C2H1g02104 | LOC_Os01g43420 | Os01g0622700 | - | Detail |
| CX1g001691 | 1:22,372,651-22,373,186 | - | - | - | - | - | - | Detail |
| CX1g003786 | 1:22,377,101-22,378,582 | - | C1H1g29168 | C2H1g11647 | LOC_Os01g43440 | Os01g0623000 | - | Detail |
| CX1g004629 | 1:22,386,539-22,388,896 | - | C1H1g20868 | C2H1g10689 | LOC_Os01g43460 | Os01g0623200 | - | Detail |
| CX1g005517 | 1:22,396,986-22,397,168 | + | - | - | - | - | - | Detail |
| CX1g006073 | 1:22,398,839-22,399,006 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g003092 | 1:22,406,699-22,406,890 | + | - | - | - | - | - | Detail |
| CX1g000368 | 1:22,416,381-22,422,004 | + | C1H1g24955 | C2H1g01444 | LOC_Os01g43480 | Os01g0623500 | - | Detail |
| CX1g004281 | 1:22,422,353-22,423,736 | - | C1H1g04827 | C2H1g06403 | LOC_Os01g43490 | Os01g0623600 | - | Detail |
| CX1g006896 | 1:22,437,451-22,447,496 | - | C1H1g31514 | C2H1g29376 | LOC_Os01g43520 | Os01g0624000 | - | Detail |
| CX1g006589 | 1:22,461,370-22,465,965 | + | C1H1g00190 | C2H1g28317 | LOC_Os01g43540 | Os01g0624500 | OsSGT1 | Detail |
| CX1g001039 | 1:22,469,001-22,470,629 | - | C1H1g11259 | C2H1g27058 | LOC_Os01g43550 | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |