| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19977 | 3:28,640,498-28,645,790 | + | C1H3g03734 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C2H3g18083 | 3:28,647,615-28,650,626 | + | C1H3g12190 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C2H3g16234 | 3:28,653,088-28,653,723 | - | C1H3g12511 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C2H3g10389 | 3:28,668,718-28,675,374 | + | C1H3g28552 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C2H3g16550 | 3:28,676,078-28,680,557 | + | C1H3g29486 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C2H3g15196 | 3:28,682,577-28,684,823 | + | C1H3g11985 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C2H3g06066 | 3:28,685,534-28,688,468 | + | C1H3g25907 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C2H3g18373 | 3:28,689,779-28,690,405 | + | C1H3g02522 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C2H3g20753 | 3:28,690,463-28,693,207 | + | C1H3g14505 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C2H3g12552 | 3:28,693,737-28,696,769 | - | C1H3g16488 | CX3g028552 | LOC_Os03g55180 | Os03g0759000 | - | Detail |
| C2H3g13001 | 3:28,703,247-28,705,175 | + | C1H3g23489 | CX3g026932 | LOC_Os03g55200 | Os03g0759500 | OsORC5 | Detail |
| C2H3g21370 | 3:28,715,870-28,720,301 | + | C1H3g02617 | CX3g030027 | LOC_Os03g55220 | Os03g0759700 | - | Detail |
| C2H3g27540 | 3:28,734,184-28,735,038 | + | C1H3g22708 | CX3g027892 | LOC_Os03g55230 | Os03g0760000 | - | Detail |
| C2H3g20624 | 3:28,739,877-28,743,239 | + | C1H3g12152 | CX3g030489 | LOC_Os03g55240 | Os03g0760200 | Bel, CYP81A6 | Detail |
| C2H3g09774 | 3:28,745,254-28,747,651 | + | C1H3g10305 | CX3g026015 | LOC_Os03g55250 | Os03g0760300 | - | Detail |
| C2H3g11478 | 3:28,749,351-28,752,939 | + | C1H3g04584 | CX3g029417 | LOC_Os03g55260 | Os03g0760500 | - | Detail |
| C2H3g24493 | 3:28,753,411-28,756,373 | - | C1H3g09452 | CX3g029986 | LOC_Os03g55270 | Os03g0760600 | - | Detail |
| C2H3g08027 | 3:28,759,062-28,762,295 | + | C1H3g27656 | CX3g030209 | LOC_Os03g55280 | Os03g0760700 | - | Detail |
| C2H3g21109 | 3:28,763,895-28,764,282 | - | C1H3g11879 | CX3g027262 | LOC_Os03g55290 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| C2H3g17978 | 3:28,767,770-28,769,312 | - | C1H3g27713 | CX3g026450 | LOC_Os03g55310 | Os03g0761000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040674 | 5:11,359,074-11,359,295 | + | - | - | - | - | - | Detail |
| CX5g038824 | 5:11,364,147-11,364,558 | + | C1H5g08150 | C2H5g00677 | - | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| CX5g039125 | 5:11,364,586-11,365,134 | - | - | - | - | - | - | Detail |
| CX5g038913 | 5:11,369,432-11,369,656 | - | - | - | - | - | - | Detail |
| CX5g039051 | 5:11,371,989-11,372,591 | - | - | C2H5g01000 | - | - | - | Detail |
| CX5g039379 | 5:11,379,627-11,380,055 | - | - | - | - | - | - | Detail |
| CX5g037400 | 5:11,394,936-11,395,343 | + | C1H5g23960 | C2H5g13191 | LOC_Os05g23470 | Os05g0299700 | - | Detail |
| CX5g041087 | 5:11,409,233-11,410,803 | + | C1H5g16907 | C2H5g29124 | LOC_Os05g23450 | Os05g0125600 | - | Detail |
| CX5g039100 | 5:11,413,507-11,418,103 | - | C1H5g10724 | C2H5g22808 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| CX5g039656 | 5:11,420,027-11,420,320 | - | - | - | LOC_Os05g23680 | - | - | Detail |
| CX5g040785 | 5:11,421,518-11,421,667 | + | - | - | - | - | - | Detail |
| CX5g037270 | 5:11,431,706-11,436,577 | + | C1H5g22140 | C2H5g10787 | LOC_Os05g23430 | Os05g0299300 | - | Detail |
| CX5g037770 | 5:11,438,865-11,443,903 | + | C1H5g26259 | C2H5g08398 | LOC_Os05g23420 | Os05g0299200 | - | Detail |
| CX5g037566 | 5:11,448,132-11,448,362 | + | - | - | - | Os05g0299101 | - | Detail |
| CX5g038267 | 5:11,449,048-11,449,257 | + | - | - | - | - | - | Detail |
| CX5g039540 | 5:11,454,641-11,456,749 | + | C1H5g16206 | C2H5g16507 | LOC_Os05g23840 | Os05g0304100 | - | Detail |
| CX5g038810 | 5:11,461,412-11,465,919 | + | C1H5g08335 | C2H5g25548 | LOC_Os05g23860 | Os05g0304400 | OsGDI2 | Detail |
| CX5g039261 | 5:11,473,536-11,478,576 | + | C1H5g06395 | C2H5g22505 | LOC_Os05g23880 | Os05g0304600 | - | Detail |
| CX5g037017 | 5:11,503,870-11,510,714 | - | C1H5g01632 | C2H5g01064 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| CX5g038283 | 5:11,524,433-11,532,890 | + | C1H5g22159 | C2H5g30014 | LOC_Os05g23940 | Os05g0305100 | - | Detail |